Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0991 ATGGTTCGAGTGAAAGGTAGAGATTATATGCCAAGGAAGAAAATCGTGAATTTGCCAGTGATTACTCGTTACGGCGGTGGATCTACGGTGGCGAAAAAAGCAGAATCACCAGAACCGATGAAACCCGCGGTGGCTGCGGCGGTGAAGGAAATCCGTTACCGCGGCGTGAGGAAGCGACCATGGGGTCGATTCGCCGCCGAAATTCGAGATCCATGGAAGAAAACTCGTGTATGGTTAGGAACTTATGATACCGCGGAACAAGCGGCTCAGGCTTATGATACTGCTGCTATCAAATTCCGTGGGTCCAAAGCCAAAACTAATTTCGCTATCCCTGAACATATTATTGCGGCCGGGGTAGTTGTTACCCCGGCCGCTATTCAGAATCCTCGGCCTCCGGTTGTTACTGATAACCGTGGGGCTGCGGTTTCGAAGTTTATTGAGCCTGTTGCTGAATTGATTAATTGGCCTACTTCTAGTGGTATGAGTAGTACTGTTGAGTCTTTTAGTGGACCTAGGGTTCATGTTGTTGGTGGTTCTTCTTCATCTGCTGCTTCCAGGGTTCATGCTGCTGGTGCTGCTGTTGTTGCTCCTAGACCTCTTGCTGCTGTTGGTGCTGGTGGAGATTTTCACAGTGATTGTGATTCATCTTCATCAGTTGTTGATGATGATGAAGATTGTGTTATTCTAACATCTTCTGCATCAGTTCAGAGGCCGCAACCACAGCCACAGCCACAACTGCTTGATATTGATCTGAATTTCCCCCCACCATTGGATGATGATGAACTGATCCGTGTCACCACCCTCTGTCTTTGA 813 0.4822 MVRVKGRDYMPRKKIVNLPVITRYGGGSTVAKKAESPEPMKPAVAAAVKEIRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTYDTAEQAAQAYDTAAIKFRGSKAKTNFAIPEHIIAAGVVVTPAAIQNPRPPVVTDNRGAAVSKFIEPVAELINWPTSSGMSSTVESFSGPRVHVVGGSSSSAASRVHAAGAAVVAPRPLAAVGAGGDFHSDCDSSSSVVDDDEDCVILTSSASVQRPQPQPQPQLLDIDLNFPPPLDDDELIRVTTLCL* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0991 270 PRINTS Ethylene responsive element binding protein signature 53 64 IPR001471 GO:0003700|GO:0006355
Mal8g0991 270 PRINTS Ethylene responsive element binding protein signature 75 91 IPR001471 GO:0003700|GO:0006355
Mal8g0991 270 SMART rav1_2 52 115 IPR001471 GO:0003700|GO:0006355
Mal8g0991 270 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3 45 235 - -
Mal8g0991 270 CDD AP2 52 110 IPR001471 GO:0003700|GO:0006355
Mal8g0991 270 Pfam AP2 domain 52 101 IPR001471 GO:0003700|GO:0006355
Mal8g0991 270 SUPERFAMILY DNA-binding domain 52 109 IPR016177 GO:0003677
Mal8g0991 270 ProSiteProfiles AP2/ERF domain profile. 52 109 IPR001471 GO:0003700|GO:0006355
Mal8g0991 270 Gene3D AP2/ERF domain 51 110 IPR036955 GO:0003700|GO:0006355
Mal8g0991 270 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 45 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0991 Mal-Chr8 14761320 14762132 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0991 43 172 AP2-EREBP Transcription Factor Family AT1G50640 55.303 5.40e-34 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal8g0991 AP2 2.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0991 K09286 - jre:109006068 138.272