Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0990 ATGGTTCGAGTGAAAGGTGTAGGTTATCAACCAGCAAGGGTTCGAGTGGAAGGCGCAACGAAGGAAATCCGTTACCGCGGCGTGAGGAAGCAAAAATCAGGTCGATTCGGTGCAGAAATTCGAGACCCGTTGAAAAAAGTATGTGTCTGGTTAGGCACTTATGATACCGCTGAACAAGCCGCCCGAGCTTACGATGCAGCGGCCATTTCATGTCGTGGGCTCAATGCCATAACAAATTTCAACCCTGATCAGGCTAATTGGCCCGCTTCCAGCGCTATGAGTAGTACCGTTGAAGCGGTTAGTGGGCCTAGGGTTGTTATTGGTTCTTTTTCAACTGCTGTATTTAGGGTTCCTGCTGTTTCTCCTAGACCTGTTGTTGCTGGTGAAGATTGTCACAGTCATTGTGATTCTTCTTCTTCTGTTGCTGATGATGAAGAAGATCATGTTGTCATTTCTTCTTCAGCTCGGAAGCCTTTAGATGTCAATCTCAATTTTCCCCCTCCACCAAATTCCGATGATGCCGAAGAGATTTGTGACACTACCTTGCGCCTCTCACTTCCAATCGCTGCCTTTGCCAATGAAGATCTAAATATCGATCTCAATCGCCCCCCTCCACCAAATTTTGATGATGATGAAGAGATTCATGCCACCACTTTGCGCCTCTCAATTCCCACCGTTGCCTTTTCCCAATGA 693 0.4704 MVRVKGVGYQPARVRVEGATKEIRYRGVRKQKSGRFGAEIRDPLKKVCVWLGTYDTAEQAARAYDAAAISCRGLNAITNFNPDQANWPASSAMSSTVEAVSGPRVVIGSFSTAVFRVPAVSPRPVVAGEDCHSHCDSSSSVADDEEDHVVISSSARKPLDVNLNFPPPPNSDDAEEICDTTLRLSLPIAAFANEDLNIDLNRPPPPNFDDDEEIHATTLRLSIPTVAFSQ* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0990 230 Pfam AP2 domain 24 73 IPR001471 GO:0003700|GO:0006355
Mal8g0990 230 SMART rav1_2 24 87 IPR001471 GO:0003700|GO:0006355
Mal8g0990 230 CDD AP2 24 83 IPR001471 GO:0003700|GO:0006355
Mal8g0990 230 PRINTS Ethylene responsive element binding protein signature 25 36 IPR001471 GO:0003700|GO:0006355
Mal8g0990 230 PRINTS Ethylene responsive element binding protein signature 47 63 IPR001471 GO:0003700|GO:0006355
Mal8g0990 230 ProSiteProfiles AP2/ERF domain profile. 24 81 IPR001471 GO:0003700|GO:0006355
Mal8g0990 230 SUPERFAMILY DNA-binding domain 24 82 IPR016177 GO:0003677
Mal8g0990 230 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 19 160 - -
Mal8g0990 230 Gene3D AP2/ERF domain 23 82 IPR036955 GO:0003700|GO:0006355
Mal8g0990 230 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3 19 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0990 Mal-Chr8 14756344 14757036 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0990 23 169 AP2-EREBP Transcription Factor Family AT1G28370 45.752 3.63e-23 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal8g0990 AP2 9.9e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0990 K09286 - twl:119992175 128.257