Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0983 ATGAGGCCTACAGACTTTCTTAGGGTTCTGAACAAGCAGTTTCTCGGAATCGCCGGTGACACTGCAAATGCTGTTTCTAAGAAGCTGCCATCGCCGCCTCCTCTTGTGCCGCGTAAACCAGCGTTTATAGATGCATTCCTGTACAAGATGAAAAAGAAACCAGAACTTCTGAAGAACAAAAACATTTGGTCACGGAGATCCACTATCTTGCCGGAGTTTGTTGATTCCCATGTCAAGATTTACAATGGGAAAACCTTTATTCGTTGTAAGATCACCGAGGGAAAAGTGGGTCATAAGTTTGGTGAGTTCGCTCTCACCAGGAAACGCAAATCCAGAGAGCAACCTAATGCCAAAGTTAAACAACTCAAGAAAAAGAAGTGA 381 0.4383 MRPTDFLRVLNKQFLGIAGDTANAVSKKLPSPPPLVPRKPAFIDAFLYKMKKKPELLKNKNIWSRRSTILPEFVDSHVKIYNGKTFIRCKITEGKVGHKFGEFALTRKRKSREQPNAKVKQLKKKK* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0983 126 MobiDBLite consensus disorder prediction 107 126 - -
Mal8g0983 126 PRINTS Ribosomal protein S19 family signature 62 81 IPR002222 GO:0003735|GO:0005840|GO:0006412
Mal8g0983 126 PRINTS Ribosomal protein S19 family signature 82 94 IPR002222 GO:0003735|GO:0005840|GO:0006412
Mal8g0983 126 PRINTS Ribosomal protein S19 family signature 94 109 IPR002222 GO:0003735|GO:0005840|GO:0006412
Mal8g0983 126 Gene3D 30s Ribosomal Protein S19; Chain A 36 121 IPR023575 GO:0003735|GO:0005840|GO:0006412
Mal8g0983 126 PANTHER RIBOSOMAL PROTEIN S19P FAMILY MEMBER 38 121 IPR002222 GO:0003735|GO:0005840|GO:0006412
Mal8g0983 126 ProSitePatterns Ribosomal protein S19 signature. 82 106 IPR020934 GO:0003723
Mal8g0983 126 Pfam Ribosomal protein S19 47 110 IPR002222 GO:0003735|GO:0005840|GO:0006412
Mal8g0983 126 Hamap 30S ribosomal protein S19 [rpsS]. 6 118 IPR002222 GO:0003735|GO:0005840|GO:0006412
Mal8g0983 126 SUPERFAMILY Ribosomal protein S19 38 111 IPR023575 GO:0003735|GO:0005840|GO:0006412
Mal8g0983 126 PANTHER 40S RIBOSOMAL PROTEIN S19, MITOCHONDRIAL 38 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0983 Mal-Chr8 14652434 14652814 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0983 52 108 Cytoplasmic Ribosomal Protein Gene Family AT5G09490 36.842 2.70e-07 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0983 K02965 - gmx:100782150 194.126