Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0971 ATGAGTATCATCAAAACAAACAAGGCTTGTGCAGCATGCAAGCATCAAAGAAGAAAGTGTTCAAGTGATTGTCCTCTAGCTCCTTATTTTCCGGCCGATAAACCAGAAATGTTCAGCACTGCTCATCGTTTGTTTGGTGTTTCCAACATACTGAGAATACTAAAAGATATCAAGGACGATGATAAAAAAGATGATGCAATGAGATCAATAATTTTTGAGTCGGATATTCGTGCAAAATACCCGGTTGATGGATGTCTTGGTGTTATTATGCATTATGAAGGTATGTTAAAGCAATCTATTGAAGAGTTAAATCGTACAAAAATGTTACTAGCTTGTTGCAAGCTAAATGACCATTTACAACAACAACAACATCTTCATTCTTCCTTACCTTCTACTAATTCTCAAATTCCAAATATTCCCATATTTAACAATGTTGGTAATGTTCCTAATTATTATTATTATCACAATAGTGATGAAAATAATATGATGAGAACCTCTTCTTCATATGTTAGTGACATCATCGCTCATGATGTTAACTATAGTGGTGGCAACAATTACATGCAAGACAATTCTGATTTGATAGTAACAAAAGGATTATTCGGTAATGAAGAATTGGACGACCTTGATGGTGGAGTTGATGCACAAATTAGAACAAATTTTGATTTGGAGAAAAAAGAAAGATTTTCAGATAGTGATTGA 699 0.3348 MSIIKTNKACAACKHQRRKCSSDCPLAPYFPADKPEMFSTAHRLFGVSNILRILKDIKDDDKKDDAMRSIIFESDIRAKYPVDGCLGVIMHYEGMLKQSIEELNRTKMLLACCKLNDHLQQQQHLHSSLPSTNSQIPNIPIFNNVGNVPNYYYYHNSDENNMMRTSSSYVSDIIAHDVNYSGGNNYMQDNSDLIVTKGLFGNEELDDLDGGVDAQIRTNFDLEKKERFSDSD* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0971 232 Pfam Lateral organ boundaries (LOB) domain 9 106 IPR004883 -
Mal8g0971 232 ProSiteProfiles LOB domain profile. 8 110 IPR004883 -
Mal8g0971 232 PANTHER LOB DOMAIN-CONTAINING PROTEIN 27-RELATED 6 154 - -
Mal8g0971 232 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 6 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0971 Mal-Chr8 14553329 14554027 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0971 6 103 AS2 family AT3G47870 54.082 1.27e-34 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mal8g0971 LOB 1.1e-33 No_clan