Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0961 ATGGCATGGCCAACCTTAATAACACTACTAATCATCACAACATCTTTCTCAAAAACACAATCCCAACAAGAATATGTAAACAACAAACAACTAGATTGTGAAAATACATACAACTCAACTTTAGGCAACATTTGCAATAGCATCCCTTCATGTCAATCCTATCTCACCTTCAAATCCACCTCACAATTCAACACCCCCTCTTCCATTTCACACCTCCTCAACTCCTCCCCTTCCCTCATCTCCCAATCCAACAACATCTCCACCGTCCAAACTCTCCCCATAGACACAATCATAACCGTCCCTATAAACTGTTCATGTTCCAACAATAACAAATACTACCAACACAACACTTCCTACACTTTACAAATCGCTGGTGAAACCTACTTCACCGTTGCTAATAACACCTACCAAGCCTTATCCACGTGTCAAGCTCTCATAGCTCAGAATCCTTATAATGAACGAAACCTTGTACCTGGTAACAACTTAACTGTTCCTCTTCGTTGTGCTTGTCCCACAAAAAAACAGAGTGATGAAGGTTTCAAGTATCTTCTCACGTACTTGGTTTCTGAAGGTGAATCAGTTTCTTCCATTGCTGAAATTTTCAACGTTGATCCACAAAGCATAAATGAAGCTAACGAGCTTTCTTCTACATCCTTTATTTTCTACTTTACACCACTTTTAATACCTCTCAAAAACGAACCGCCGCAAAAAATAGTAAAACAAGCTTCACCGCCGGAGTCTCCGACGCCGCCGCCTCCTCCGGCGGCGGAAGACGGTGGTTCTTCCTCTTCCAAGAAATGGATCATCGTCGGTGTTGCGGTTGGAGTTGTTGTTTTGCTTCTGGTGGGCCTTGCTCTGTTTTTCCTCTGTTTCCGGCGACGGCGACAACAGAAGCTATCACCGCCGGTGGTTAAGGCTTTTTCAGATGCTGACACAAAGAAGGTTTCAGAGATTACTTCAACATCTCAATCTTGGTCTCTTTCTTCTGAGGGAATTCGTTATGCGGTTGATTCATTGACTGTGTACAAGTTTGTAGATTTGCAAAATGCAACAAATTTTTTCAGTGAAGAGAATAAGATTAAAGGTTCTGTTTATAAAGCTTCTTTTAAAGGTGATGATGCTGCTGTTAAGATTCTTAAAGGTGATGTTTCTTCTGAGATTAACATTTTGAAGAGGATTAATCATGCTAATATTATAAGGTTGTCTGGTTTTTGTGTCTACAAAGGTAATACTTATCTTGTTTATGAGTTTGCTGAGAATGATTCTCTTGATGATTGGCTTCACTCTGAGAAGAACAATAACAAGAATTATGATAATTCGAATTCGATGTGTTTGAGTTGGTTTCAAAGAGTTCAGATTGCTCATGATGTAGCTGATGCACTTAATTACCTTCATAATTATGCTAATCCACCTCATGTTCATAAGAATTTGAAAAGTGGTAATATTCTTTTAGATGGAAAATTTAGAGGTAAAGTTTCAAATTTTGGGTTGGCAAGAGTTATGGAGAATGAAGGAGGGGATGAAGGGTTTCAATTAACAAGACATGTAATAGGGACACAAGGTTACATGGCACCTGAATATATTGAGAATGGTTTGATTACTCCAAAGATGGATGTTTTTGCTTTTGGTGTTGTGATTTTGGAGCTTCTTTCTGGAAGAGAAGTTGTTGGTGGTGACAAGAGTAATGGTTTGGGAGATCAGCTTCTAGCTTCAACTGTGAATCAGGTTCTTGAAGGGGAGAATGTTAGGGAGAAACTTAGAGGTTTCATGGATCCAAATTTGAGGGATGAATATCCTTTGGATCTTGCATTTTCAATGGCTGAGATTGCTAAAAGATGTGTTGCTCGTGACCTTAATTCAAGACCAAATGTTTCTGAGGTTTTCATGGTTTTGTCTAAGATTCAATCTTCTACATTGGAGTGGGATCCATCTGATGAACTTGAACGGTCCAGATCTGTTAGCCAAGTTTCTGATAGTAGATAG 1983 0.3928 MAWPTLITLLIITTSFSKTQSQQEYVNNKQLDCENTYNSTLGNICNSIPSCQSYLTFKSTSQFNTPSSISHLLNSSPSLISQSNNISTVQTLPIDTIITVPINCSCSNNNKYYQHNTSYTLQIAGETYFTVANNTYQALSTCQALIAQNPYNERNLVPGNNLTVPLRCACPTKKQSDEGFKYLLTYLVSEGESVSSIAEIFNVDPQSINEANELSSTSFIFYFTPLLIPLKNEPPQKIVKQASPPESPTPPPPPAAEDGGSSSSKKWIIVGVAVGVVVLLLVGLALFFLCFRRRRQQKLSPPVVKAFSDADTKKVSEITSTSQSWSLSSEGIRYAVDSLTVYKFVDLQNATNFFSEENKIKGSVYKASFKGDDAAVKILKGDVSSEINILKRINHANIIRLSGFCVYKGNTYLVYEFAENDSLDDWLHSEKNNNKNYDNSNSMCLSWFQRVQIAHDVADALNYLHNYANPPHVHKNLKSGNILLDGKFRGKVSNFGLARVMENEGGDEGFQLTRHVIGTQGYMAPEYIENGLITPKMDVFAFGVVILELLSGREVVGGDKSNGLGDQLLASTVNQVLEGENVREKLRGFMDPNLRDEYPLDLAFSMAEIAKRCVARDLNSRPNVSEVFMVLSKIQSSTLEWDPSDELERSRSVSQVSDSR* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0961 660 Gene3D Transferase(Phosphotransferase) domain 1 418 653 - -
Mal8g0961 660 SUPERFAMILY Protein kinase-like (PK-like) 327 628 IPR011009 -
Mal8g0961 660 Gene3D LysM domain 172 242 IPR036779 -
Mal8g0961 660 ProSiteProfiles LysM domain profile. 184 228 IPR018392 -
Mal8g0961 660 SMART LysM_2 118 165 IPR018392 -
Mal8g0961 660 SMART LysM_2 54 101 IPR018392 -
Mal8g0961 660 SMART LysM_2 185 229 IPR018392 -
Mal8g0961 660 MobiDBLite consensus disorder prediction 237 260 - -
Mal8g0961 660 PANTHER PROTEIN LYK5 10 651 - -
Mal8g0961 660 Pfam LysM domain 186 229 IPR018392 -
Mal8g0961 660 ProSiteProfiles Protein kinase domain profile. 276 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g0961 660 Gene3D Phosphorylase Kinase; domain 1 314 417 - -
Mal8g0961 660 SUPERFAMILY LysM domain 184 229 IPR036779 -
Mal8g0961 660 Pfam Protein kinase domain 373 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g0961 660 CDD LysM 185 221 IPR018392 -
Mal8g0961 660 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 10 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0961 Mal-Chr8 14493860 14495842 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0961 5 653 Receptor kinase-like Gene Family AT2G33580 53.630 0.0 638
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mal8g0961 Pkinase 4.6e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0961 - - gmx:100818534 866.685