Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0956 ATGGCAACAAAAGGAGCGAAAAGGGTTGATGCTGTTGATTCTCGATCGGCTTCTGTTCTCGCTCGTGCCAAAGATGGCAGTGCTTTAGCTAAATGGTTCTGTAACAAAGATGTTCCTGTTGCACTCATTGACATGCACAGTTGTAGCCTTGAAAAGCCTAATTCGAAAGAACCAAATGCGAAAAGGGTTAAGGTTGGGAAAGGGAAAAAGGTTAAGGATCCTAATGCGCCGAAGCGTCCCCTCACTGCTTTCTTTGTCTTTATGGATGATTTTAGAAAGACTTTTAAGGAAGCTAACGCTGATTCCAAGGATGTTAAAAGGGTTGGTAAGGAAGTTGGTGAGAAGTGGAGGTCTTTGACTGATGAAGAGAAGAAGCCTTATTTGGATAAAGTTGTTGAACTGACGGCAGAGTATGAGAAGGCCTATAATGCTGCTGCTGAAAATGAGCAATACCCAGGTTTGTGTAACATTGATCATAGTGTTAGCGATGAAGAATGA 498 0.4237 MATKGAKRVDAVDSRSASVLARAKDGSALAKWFCNKDVPVALIDMHSCSLEKPNSKEPNAKRVKVGKGKKVKDPNAPKRPLTAFFVFMDDFRKTFKEANADSKDVKRVGKEVGEKWRSLTDEEKKPYLDKVVELTAEYEKAYNAAAENEQYPGLCNIDHSVSDEE* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0956 165 CDD HMGB-UBF_HMG-box 77 141 - -
Mal8g0956 165 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 77 146 IPR009071 -
Mal8g0956 165 Pfam HMG (high mobility group) box 77 143 IPR009071 -
Mal8g0956 165 MobiDBLite consensus disorder prediction 50 76 - -
Mal8g0956 165 SUPERFAMILY HMG-box 64 143 IPR036910 -
Mal8g0956 165 PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED 4 52 - -
Mal8g0956 165 PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED 51 149 - -
Mal8g0956 165 MobiDBLite consensus disorder prediction 55 76 - -
Mal8g0956 165 SMART hmgende2 76 147 IPR009071 -
Mal8g0956 165 Gene3D High mobility group box domain 60 153 IPR036910 -
Mal8g0956 165 PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED 4 52 - -
Mal8g0956 165 PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED 51 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0956 Mal-Chr8 14360221 14363847 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Mal8g0956 HMG_box 5.9e-19 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0956 K25507 - gmx:100306558 201.06