Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0954 ATGCTTCAAACTTTGGATATAAGTTACAACTTTTTTCATGGAACTATTCCATATCAAATTGGTAACTTATCCAAAATTTCTAAACTAAAAATGAGTCATAATCTTTTCAATGGTTTCATTCCTCAAGAAATAGGAAAACTAAGAAATCTAAGTCACCTTAAAATTGTAAGGTGTAAACTCATTGGTTCCATTCCTTCAACAATTGGAATGTTGACAAATCTTGTTGAACTTGATTTGTCGGCTAACTATCTCTCTGGGGAAATCCCTTCAATAATAAACTTGATGAAGTTAGAAAAACTTGTTCTCTACGGAAACTCTCTTTCTGGACCGATTCCTATTGAGTTAGGAACAATTTCTTCTCTTAGAACAATTAAATTGTTAAAAAATAAATTTTCTGGTCCAATTCCATTTTCTATAGGAAACTTGACAAATTTGAGGACACTTCAACTCACTAAAAATCAAATTGTTGGATCAATTCCTTGTTCTATTGGAAACTTGACAAAACTCATTCAATTGTCAATTTCTGAAAACCAGCTTTCTGGATCAATTCCTTCTTCAATAGGAAACTTGATCAATCTAGAAAGGCTTAGTCTTTCACAAAATAATCTTTCTGGATCTATTCCTTCAACCTTTGGAAATTTGACCAAACTAACCTTTCTATTACTTTACACAAACAAACTTAATGGTAGCATTCCAAAAACAATGAATAACATTACCAATTTGCAAAACTTGCAACTAAGTTCAAATGATTTCACTGGTCAATTGCCACATCAAATTTGCCTTGGTGGATCACTTAGAAATTTTTCAGCTAATGAGAATCATTTTAGTGGTTTTGTTCCGAGAAGCTTGAAGAATTGTTCAAGCCTTCTTAGACTTAACCTAGAAAAAAATATGTTGATTGGAAATATTTCAGATGATTTTGGTGTATATCCAAATTTGAGCTACATTTATTTGAGTCACAATTATTTTTATGGCCAAATTTTGCCAAGTTTGGTAAAAAGTCATAACCTAATTGGCCTAAAGATCTCAAATAACAATTTATCAGGTACTATACCTTCAGAACTAGGTCAAGCACCTAAGTTACAATTACTTCAACTCTCTTCAAATCATCTAATAGGAAAAATTCCTAAAGAGCTTTGTAAATTGACTTCTATGTTTGAACTCTCCATGAGTAATAATGACCTTTCTGGAAACATTCCTATAGAAATAGGATCCATGCAAGGACTTAGAAACTTGAATCTTGCAGCAAATAATTTAAGTGGCTCAATTCCAAAACAAATTGGAAATCTTCTCAAATTAGTTCATTTGAATTTGAGCAATAATAAGTTCATGGAAAACATTTCCCTTGAATTTAACAGATTGCAATCTCTTGAAAATCTTGATCTTGGTGGAAATTTGTTAAATGGAAAAATACCAGAATCACTTGGAATGTTGCAAAAGTTGAACACTTTGAACCTCTCTCACAACAATCTGTCTGGAATCATTCCATCCAATTTTGAGGATTTAATTAGCTTGATAAGTGTTGACATATCTTACAACCAATTAGAGGGTTCAATTCCTAACAGTCAAGTGTTTCTTAATGCACCATTTGAAGCATTGAGAAACAATAAAGGCTTGTGTGGTAATTCATCAATCTTGGTACCTTGCAATGAGTTGAGTCATCACAGCATAAAAAGTAAAAACAAAAATGTGATATTTGCACTATGTATTACTTTGAGTATTCTCTTTCTTTTAGTAGTTTTGGTTGGTGGTTCTTTATATATTCATTTGCAAAAAGCAAGAAAAATTCAAAAGCAAGCTAGAGAAGAACAAGAACAAACTCAAGATATTTTTTCCATATGGAGTTATGATGGCAAAATGGTGTATGAAAATATCATTGAAGCAACAGAGGATTTTGATGAGAAATATCTAATTGGTAAAGGAGGTTCTGGTTCTGTTTACAAGGTTAATTTACCCTCAGGACAAGTTGTTGCTGTGAAAAAACTTCATGCTGAAGTTGATAGTGAAATGCACAATTTCAAGGCTTTTACTAATGAGGTTAAAGCATTGACACAAATCAAACATCGTAACATTGTGAAGTTATATGGATTTTGTTCACATCCGCGCCACTCTTTCGTGGTTTATGAGTTCCTAGAAGGAGGGAGCTTGGATAGTGTAATGAGACTTGATACACTAGCAACAATGTTTGATTGGAAAAAGAGAGTGAATGTTGTTAAGGGTGTGACAAATGCTCTTTACCATATGCATCATGGTTGCTTTCCTCCTATTGTTCATCGCGATATATCAAGCAAAAATGTTCTTTTAAATTTGGATTATAAAGCTTACATCTCAGACTTTGGAACAGCTAAGATTCTTAATCTTGATTCACAAAATTCAACAACATTTGCAGGCACTTATGGTTATTCAGCACCAGAGCTTGCATATACTCAGGAAGTGGATGAGAAATGTGATGTGTTTAGTTTTGGAGTGCTATGTTTGGAAATAATCATGGGAAAACATCCAGGGGATCTCATTTCTACATTACTTTCATCATCTGAAGCACCAATAGCATATAATTTGCTATTGAAAGATGTATTAGACTCAAGACTTCCACTTCCAGAAAGTTCAGTTGCTAAGGATGTGATCTTGATTGCAAAAATGGCATTTGCTTGCTTGAGTCAGAATCCACATTCTCGACCAACAATGAAACAAGTGTATAACATGTTTGTGATGTCAAAATCACCATTAATGGAGACACTCTGCATCATCACACTTGGTCAACTTCTAGATTAA 2772 0.3308 MLQTLDISYNFFHGTIPYQIGNLSKISKLKMSHNLFNGFIPQEIGKLRNLSHLKIVRCKLIGSIPSTIGMLTNLVELDLSANYLSGEIPSIINLMKLEKLVLYGNSLSGPIPIELGTISSLRTIKLLKNKFSGPIPFSIGNLTNLRTLQLTKNQIVGSIPCSIGNLTKLIQLSISENQLSGSIPSSIGNLINLERLSLSQNNLSGSIPSTFGNLTKLTFLLLYTNKLNGSIPKTMNNITNLQNLQLSSNDFTGQLPHQICLGGSLRNFSANENHFSGFVPRSLKNCSSLLRLNLEKNMLIGNISDDFGVYPNLSYIYLSHNYFYGQILPSLVKSHNLIGLKISNNNLSGTIPSELGQAPKLQLLQLSSNHLIGKIPKELCKLTSMFELSMSNNDLSGNIPIEIGSMQGLRNLNLAANNLSGSIPKQIGNLLKLVHLNLSNNKFMENISLEFNRLQSLENLDLGGNLLNGKIPESLGMLQKLNTLNLSHNNLSGIIPSNFEDLISLISVDISYNQLEGSIPNSQVFLNAPFEALRNNKGLCGNSSILVPCNELSHHSIKSKNKNVIFALCITLSILFLLVVLVGGSLYIHLQKARKIQKQAREEQEQTQDIFSIWSYDGKMVYENIIEATEDFDEKYLIGKGGSGSVYKVNLPSGQVVAVKKLHAEVDSEMHNFKAFTNEVKALTQIKHRNIVKLYGFCSHPRHSFVVYEFLEGGSLDSVMRLDTLATMFDWKKRVNVVKGVTNALYHMHHGCFPPIVHRDISSKNVLLNLDYKAYISDFGTAKILNLDSQNSTTFAGTYGYSAPELAYTQEVDEKCDVFSFGVLCLEIIMGKHPGDLISTLLSSSEAPIAYNLLLKDVLDSRLPLPESSVAKDVILIAKMAFACLSQNPHSRPTMKQVYNMFVMSKSPLMETLCIITLGQLLD* 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0954 923 ProSiteProfiles Leucine-rich repeat profile. 480 501 IPR001611 GO:0005515
Mal8g0954 923 Gene3D Phosphorylase Kinase; domain 1 591 710 - -
Mal8g0954 923 ProSitePatterns Protein kinases ATP-binding region signature. 638 661 IPR017441 GO:0005524
Mal8g0954 923 SUPERFAMILY Protein kinase-like (PK-like) 611 903 IPR011009 -
Mal8g0954 923 SUPERFAMILY RNI-like 201 522 - -
Mal8g0954 923 Pfam Leucine Rich Repeat 480 501 IPR001611 GO:0005515
Mal8g0954 923 Pfam Protein kinase domain 634 900 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g0954 923 Gene3D Ribonuclease Inhibitor 1 90 IPR032675 -
Mal8g0954 923 Gene3D Transferase(Phosphotransferase) domain 1 711 911 - -
Mal8g0954 923 Gene3D Ribonuclease Inhibitor 190 259 IPR032675 -
Mal8g0954 923 ProSiteProfiles Leucine-rich repeat profile. 73 95 IPR001611 GO:0005515
Mal8g0954 923 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 921 - -
Mal8g0954 923 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 921 - -
Mal8g0954 923 ProSiteProfiles Protein kinase domain profile. 632 910 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g0954 923 ProSitePatterns Tyrosine protein kinases specific active-site signature. 756 768 IPR008266 GO:0004672|GO:0006468
Mal8g0954 923 Gene3D Ribonuclease Inhibitor 91 186 IPR032675 -
Mal8g0954 923 SMART LRR_typ_2 142 166 IPR003591 -
Mal8g0954 923 SMART LRR_typ_2 190 213 IPR003591 -
Mal8g0954 923 SMART LRR_typ_2 71 95 IPR003591 -
Mal8g0954 923 SMART LRR_typ_2 406 430 IPR003591 -
Mal8g0954 923 SMART LRR_typ_2 238 262 IPR003591 -
Mal8g0954 923 SMART LRR_typ_2 454 477 IPR003591 -
Mal8g0954 923 SMART LRR_typ_2 478 501 IPR003591 -
Mal8g0954 923 SMART LRR_typ_2 502 527 IPR003591 -
Mal8g0954 923 Gene3D Ribonuclease Inhibitor 260 551 IPR032675 -
Mal8g0954 923 SUPERFAMILY L domain-like 2 299 - -
Mal8g0954 923 SMART LRR_sd22_2 441 462 - -
Mal8g0954 923 SMART LRR_sd22_2 142 168 - -
Mal8g0954 923 SMART LRR_sd22_2 190 216 - -
Mal8g0954 923 SMART LRR_sd22_2 71 96 - -
Mal8g0954 923 Pfam Leucine rich repeat 143 203 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0954 Mal-Chr8 14338102 14341249 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0954 2 804 Receptor kinase-like Gene Family AT4G08850 44.005 0.0 653
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mal8g0954 Pkinase 1.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0954 - - gmx:100800924 1162.52