Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0926 ATGGTTCTGTTATTATCAATTTGTATATATGTTAGATACTTTCGAAAAAAGAATGGAGAAGAGCATAAATTGCCACCAAATGATTCTATGACACCTTCAACTAAAGATGTTGATAAAGATATCAATGGTGATATTGGATCCAAATATATTATAGTGGACAAATCACCAGAGTTTTCGTACGAAGAACTAGCCAATGCTACAAATAACTTCAGTTTGGCTAAAAAAATTGGTCAAGGTGGTTTTGGAGAGGTCTACTATGGAGAGCTGAGAGGCCAGAAAATTGCAATCAAGAAGATGAAGATGCAAGCAACAAGAGAATTTCTTTCTGAACTGAAAGTCTTAACAAGGGTTCATCACTGCAACCTGGTACACTTGATTGGATATTGTGTCGAGGGATTTCTATTCCTTGTGTATGAATACATGGACAATGGAAACTTAAGCCAACATCTATATAATTCAGAGAAAGAACCGATGACATTGTCTAGAAGGATGGAAATTGCCCTGGATGTTGCGAGAGGCCTTGAGTATATTCATTATCATTCCGTTCCTGTATATATCCATCGCGACATAAAATCAGATAATATATTGTTAAATGAAAACTTCATTGGTAAGATTGCTGATTTTGGATTAACCAAGCTTACTGATGCTGCAAGTTCAGCAGATAACACAGATCATGTGGCAGGCACATTTGGTTACATGCCGCCTGAAAATGCATACGGACGTATTTCTCGCAAGATAGATGTTTATGCTTTTGGAGTTGTTCTTTATGAACTAATTTCTGCTAAAGCAGCTGTGGTCAAGATCAATAAAACCGAGTTCAAGAGCCTTGAGATTAAGACCAACGAATCTATTGACGAGTACAAGAGCCTTTTTGATGAAGTTATGGATCAAAAGGGAGATCCTATAGAAGGTCTAAGAAAAATGGTGGATCCAAGGCTAGGAGATAACTATTCATTTGATTCCATTAGCAAGATGGCACAGCTTGCCAAGGCTTGCATAAATCGAGATCCGAAACAACGACCAACAATGAGAGCTGTTGTGGTTTCTCTTATGACACTGAATTCTACAATTGATAATGGAAGTAGGACAGGTAGTGCAGAGTTGAGTACTACTATGGAGCATGACTCAAATTGA 1134 0.3757 MVLLLSICIYVRYFRKKNGEEHKLPPNDSMTPSTKDVDKDINGDIGSKYIIVDKSPEFSYEELANATNNFSLAKKIGQGGFGEVYYGELRGQKIAIKKMKMQATREFLSELKVLTRVHHCNLVHLIGYCVEGFLFLVYEYMDNGNLSQHLYNSEKEPMTLSRRMEIALDVARGLEYIHYHSVPVYIHRDIKSDNILLNENFIGKIADFGLTKLTDAASSADNTDHVAGTFGYMPPENAYGRISRKIDVYAFGVVLYELISAKAAVVKINKTEFKSLEIKTNESIDEYKSLFDEVMDQKGDPIEGLRKMVDPRLGDNYSFDSISKMAQLAKACINRDPKQRPTMRAVVVSLMTLNSTIDNGSRTGSAELSTTMEHDSN* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0926 377 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672|GO:0006468
Mal8g0926 377 SMART serkin_6 70 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g0926 377 ProSitePatterns Protein kinases ATP-binding region signature. 76 98 IPR017441 GO:0005524
Mal8g0926 377 PANTHER LYSM DOMAIN RECEPTOR-LIKE KINASE 3 1 366 - -
Mal8g0926 377 ProSiteProfiles Protein kinase domain profile. 70 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g0926 377 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 1 366 IPR044812 GO:0019199|GO:0045087
Mal8g0926 377 Pfam Protein tyrosine and serine/threonine kinase 71 288 IPR001245 GO:0004672|GO:0006468
Mal8g0926 377 Gene3D Transferase(Phosphotransferase) domain 1 141 372 - -
Mal8g0926 377 Gene3D Phosphorylase Kinase; domain 1 44 140 - -
Mal8g0926 377 SUPERFAMILY Protein kinase-like (PK-like) 48 350 IPR011009 -
Mal8g0926 377 PIRSF TyrPK_CSF1-R 147 263 - -
Mal8g0926 377 PIRSF TyrPK_CSF1-R 316 377 - -
Mal8g0926 377 PIRSF TyrPK_CSF1-R 39 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0926 Mal-Chr8 13828749 13830974 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0926 46 359 Receptor kinase-like Gene Family AT3G21630 60.568 6.91e-130 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mal8g0926 PK_Tyr_Ser-Thr 3.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0926 - K13429 mtr:MTR_5g086080 634.024