Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0920 ATGGTTCTGTTATTATCAATTTGTATATATGTTAGATACTTTCGAAAGAAGAATGGAGAAGAGTTTAAATTCCCACAAAATGATTCTATGACACCTTCAACTAAAGATGTTGATAAAGATGCCAGTGGTGATAATGGATCCAAATATATTATGGTGGACAAATCACCAGAGTTTTCGTACGAAGAACTAGCCAATGCTACAGATAATTTCAGTTTTGCTAACAAAATTGGTCAAGGTGGTTTTGGTGAGGTCTACTATGGAGAGTTCAGAGGCAAGAAAATTGCAATCAAGAAGATGAAGACGCAAGCAACAAGAGAATTTCTTTCTGAACTGAAAGTTTTAACAAGTGTTCATCACTGGAACCTGGTACACTTGATTGGATATTGTGTTGAGGGATTTCTATTCCTTGTGTATGAATACATGGAAAATGGAAACTTAAGCCAACATCTGCATAATTCAGAGAAAGAACCGATGACATTGTCTACAAGGATAATAATTGCTCTGGATGTAGCGAGAGGCCTTGAGTATATTCATGACCATTCTGTTCCTGTATATATCCATCGCGACATAAAATCAGATAACATTTTGTTAAATGAAAACTTTACTGGCAAGATTGGTGATTTTGGATTAACAAAGCTTACTGATGCTGTAAGATCAGCAGATAACACTGGTCATGTGGCAGGCACATTTGGTTACATGCCACCTGAAAATGTATACGGACATATTTCTCGCAAGATAGATGTGTATGCTTTTGGAGTTGTTCTTTATCAACTAATTTCTGCTAAAGCAGCTGTAATCAAGATGGATAAAACCGAGTTCGAGTTCAAGAGCCTTGAGATAAAGACCAATGAATCTATTGATGAGTACAAGAGCCTTGTAGCTTTGTTTGATGAAGTTATGGATCAAACGGGAGATCCTATAGAAGGTCTAAGAAAACTGGTGGATCCAAGGCTAGGAGATAACTATTCAATTGATTCCATTAGCGAGATGGCTCAGCTTGCCAAGGCTTGCATAAACCGAGATCCAAAACAACGTCCAAGAATGAGATCTGTTGTAGTTTCTCTTATGAAACTGAACTCTACAATTGATGATGGTAGTAGGACTAATGCAGAGTTGAGTACTACTATAGAGCATGACTCAAATGGAAATGAAATTCCAATGTGA 1164 0.3703 MVLLLSICIYVRYFRKKNGEEFKFPQNDSMTPSTKDVDKDASGDNGSKYIMVDKSPEFSYEELANATDNFSFANKIGQGGFGEVYYGEFRGKKIAIKKMKTQATREFLSELKVLTSVHHWNLVHLIGYCVEGFLFLVYEYMENGNLSQHLHNSEKEPMTLSTRIIIALDVARGLEYIHDHSVPVYIHRDIKSDNILLNENFTGKIGDFGLTKLTDAVRSADNTGHVAGTFGYMPPENVYGHISRKIDVYAFGVVLYQLISAKAAVIKMDKTEFEFKSLEIKTNESIDEYKSLVALFDEVMDQTGDPIEGLRKLVDPRLGDNYSIDSISEMAQLAKACINRDPKQRPRMRSVVVSLMKLNSTIDDGSRTNAELSTTIEHDSNGNEIPM* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0920 387 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672|GO:0006468
Mal8g0920 387 ProSiteProfiles Protein kinase domain profile. 70 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g0920 387 PANTHER LYSM DOMAIN RECEPTOR-LIKE KINASE 3 1 369 - -
Mal8g0920 387 ProSitePatterns Protein kinases ATP-binding region signature. 76 98 IPR017441 GO:0005524
Mal8g0920 387 SMART serkin_6 70 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g0920 387 PIRSF TyrPK_CSF1-R 325 384 - -
Mal8g0920 387 PIRSF TyrPK_CSF1-R 148 263 - -
Mal8g0920 387 PIRSF TyrPK_CSF1-R 39 167 - -
Mal8g0920 387 SUPERFAMILY Protein kinase-like (PK-like) 47 355 IPR011009 -
Mal8g0920 387 Gene3D Phosphorylase Kinase; domain 1 41 140 - -
Mal8g0920 387 Gene3D Transferase(Phosphotransferase) domain 1 141 380 - -
Mal8g0920 387 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 1 369 IPR044812 GO:0019199|GO:0045087
Mal8g0920 387 Pfam Protein tyrosine and serine/threonine kinase 71 275 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0920 Mal-Chr8 13722345 13725068 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0920 1 372 Receptor kinase-like Gene Family AT3G21630 52.455 1.10e-127 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mal8g0920 PK_Tyr_Ser-Thr 2.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0920 - K13429 mtr:MTR_5g086080 651.358