Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0913 ATGGTTCTGTTATTAGCAATTTGTATATATGTTAGATACTTCCGAAAGACGAAAAGAGTGGAGGCTACACCTTCAACTAAAGATGGATCCAAATTCGTTGTGGCGGGCAAATCACAAGAGTTTTCGTACGAAGAACTAGCTAATGCTACAGATAACTTCAGTTTGGCTAGTAAAATTGGTCAAGGTGGTTTTGGAGAGGTCTACTATGGAGAGCTGAGAGGCAAGAAAACCGCAACCAAGAAGATGAAGATGCAAGCAACAAGAGATTTTCTTGCTGAACTGAAAGTCTTAACAAGTGTTCATCACTGCAACCTGGTACACTTGATTGGATATTGTGTTGAGAGATCTCTATTACTTGTCTATGAATACATGGACAATGGAAACTTAAGCCAATATCTACATAATTCAAAGAGAGAAACGATGCCGTGGTCTACCAGGGTACAAATTGCTCTGGATGTAGCGAGAGGCCTCGAGTATATTCATGATCATTCAGTGCCTGTATATATCCATCGCGATATAAAATCAGATAATATTTTATTAAATGAAAACTTCACTGCAAAGATTGCAGATTTTGGATTAACAAAACTGACGGATGTTGCAAGTTCAACAGATAACACTGATCATGTGGCAGGCACATTTGGTTACATGCCACCTGAAAATGCATACGGACATATTTCTCGTAAGATAGATGTATATGCTTTTGGAGTTGTTCTTTATGAACTAATTTCTGCTAAACCAGCAGTGGTCAAGATCGATAAAACCGAGTTTGAGTTCAAGAGCCTTGAGATTAGGACCAATGAATCTACTGACGAATACAAGAGCCTTGTAACCTTGTTTGATGAAGTTATTGATCAAGAGGGAGGTCCTATTGAAGGTCTAAGAAAGATGGTGGATTCAAGGCTAGGAAATAATTATTCAATTGATTCTATTAGCAAGATGGCACAGCTTGCCAAGGCTTGCACAAACCGAGATCCGAGACAACGTCCAAGAATGAGAGCTGTTGTGGTTTCTCTTATGAACCTTAATTCTACAATTGATGATGAAAGAAGCACAGGTAGTGAAGCATTGAGTCCCACTATGAAGCATGATGATTAA 1095 0.3881 MVLLLAICIYVRYFRKTKRVEATPSTKDGSKFVVAGKSQEFSYEELANATDNFSLASKIGQGGFGEVYYGELRGKKTATKKMKMQATRDFLAELKVLTSVHHCNLVHLIGYCVERSLLLVYEYMDNGNLSQYLHNSKRETMPWSTRVQIALDVARGLEYIHDHSVPVYIHRDIKSDNILLNENFTAKIADFGLTKLTDVASSTDNTDHVAGTFGYMPPENAYGHISRKIDVYAFGVVLYELISAKPAVVKIDKTEFEFKSLEIRTNESTDEYKSLVTLFDEVIDQEGGPIEGLRKMVDSRLGNNYSIDSISKMAQLAKACTNRDPRQRPRMRAVVVSLMNLNSTIDDERSTGSEALSPTMKHDD* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0913 364 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Mal8g0913 364 SMART serkin_6 53 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g0913 364 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 1 352 IPR044812 GO:0019199|GO:0045087
Mal8g0913 364 SUPERFAMILY Protein kinase-like (PK-like) 29 338 IPR011009 -
Mal8g0913 364 ProSiteProfiles Protein kinase domain profile. 53 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g0913 364 PIRSF ILK 290 353 - -
Mal8g0913 364 PIRSF ILK 16 285 - -
Mal8g0913 364 PANTHER LYSM DOMAIN RECEPTOR-LIKE KINASE 3 1 352 - -
Mal8g0913 364 Gene3D Phosphorylase Kinase; domain 1 24 123 - -
Mal8g0913 364 Pfam Protein tyrosine and serine/threonine kinase 55 337 IPR001245 GO:0004672|GO:0006468
Mal8g0913 364 Gene3D Transferase(Phosphotransferase) domain 1 124 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0913 Mal-Chr8 13645009 13647113 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0913 37 344 Receptor kinase-like Gene Family AT3G21630 61.364 1.56e-128 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mal8g0913 PK_Tyr_Ser-Thr 4.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0913 - K13429 mtr:MTR_5g086080 554.673