Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0880 ATGACCAGAATTAGTTGTAGCAGTAAAAAATTTACAATCTTCTTGTTGATTATTTCCTTCTTGCATGGTGCTACTTCTCTTACCTCTGATGGGTTGACTCTGCTGTCACTCTTGACTCACTGGACCTTTGTTCCTCCTCTTATCAACTCTACCTGGAATGCCTCTGATTCCAATCCATGCTCATGGGTTGGTGTTCAATGTGACCATACCAACAATGTCATTTCCATTAGTCTCACTGGTCATGGGATTTTCGGTCAACTTGGACCACAAATTGAAAACCTTTATCACTTGCAGAAGCTTGTGTTGTTGGGTAATGGTTTCTCAGGAAAAGTGCCTTTAGAGTTAAGTAACTGTAGTTTCCTTGAGTATTTAGACCTTTCTGAGAATAGATTCAGTGGAAATATACCATATAGTTTGAAAAAGTTGCAAAGTTTAAAGTTTATGAGATTGTCTTCCAATCTGCTGACTGGTGAAATTCCAGATTCTTTGTTTGAAATTCAATCCCTTGAAGAAGTGAGCCTGCACAATAACCTTCTTAGCGGAAATATTCCAACCAACATTGGAAACTTGACTCATCTATTGAGATTGTATCTACATGGTAATATGTTTTCAGGGACTATTCCTTCATCTCTTGGTAATTGCAGTAAACTAGAGGACGTTGATTTGTCTTTCAACCGTTTGAGAGGCAAAATTCCGGTCAGTATTTGGAGAATTCAAAGTCTTGTGCACATCTTGGTTCACAACAACAGTCTCTTTGGGGAACTACCTTTGGAAATGACAAACCTGAAGTGTCTAAAAAATGTCTCATTGTTCGAAAATCAGTTCTCAGGAATCATACCTCAAAGCTTGGGAATCAACAGCAGCTTAGTGAAGTTGGACGGTATGAATAACAAGTTCAGTGGCAATATCCCACCCAATCTTTGCTTTGGAAAGCATTTGTTAGAGCTCAACATGGGAATCAATCAACTTAAGGGTGTAATACCTTCTGATATAGGAAGATGTGCAACTCTAAGGAGGTTGTTTCTCAATGACAATAATTTCACCGGGTCGCTTCCTGACTTTGAAAGTAATCTTAACCTAAAATACATGGACATAAGCAAGAACAATATCGGTGGACCAATTCCATCAAGTTTGGGAAATTGCACATATCTCACATACATTAATTTGTCAAGGAACAAATTTGCAGGGTTCATACCATCAGAGCTTGGAAACCTTATGAATCTTGTGATTTTGGATCTTGCTCACAATAATTTGGAAGGTCCTTTGCCACTTCGGCTTTCAAACTGTACTAAAATGGATCGTTTTGATGTGGGATTCAATTTCCTAAATGGATCACTTCCATCAAGTTTAAGAAGTTGGGCACACATAACTACATTGATTTTCAGAGAAAATTACTTCACGGGAGGTATCCCAGAGTTTTTGACAGAATTTAGCAACCTTCGCGAGTTACAACTTGGTAGAAATTTGCTTAGAGGCAAAATTCCTCGATCGATAGGGGCATTGCATAATCTGTTCTATGGATTGAATCTGAGTTCTAATGGATTAACTGGTAGCATTCCTTCAGAAATTGGGAAGCTAGGACTACTGCAAAGTCTGGATATATCCTTGAACAATTTAACAGGAAGCATATATGCTCTTGAAAGTCTTGTTTCATTAATTGAGGTCAATGTTTCTTACAATCTCTTCAATGGTTCTGTACCGACAGGTCTAATGAAGTTATTGAATTCCTCACCATCATCATTCATGGGTAATCCTCTCCTATGTATCAGTTGTTTGAGTTGCATTGAAACTAGTTATATAAATCCATGTGTCTACAAGTCAACTGATCACAAAGGTATCAATAATGTTCAAATTGTGTTGATAGAACTTGGATCCTCAATATTTATTTCTGCTGTGCTGCTAATAATGATTCGAGTGTATCTCCTCAAAAGATATAAGCAGGAATTCAAGATGTCTTGTTCCCCAGTGGTCTTGGTGTTGAAGGCTATGGCTAAACTATATGACTGCTATAATATTGGTAAAGCAATCGTGTGTAAAACCCAAAGGGCATCCAATATTAAGCAGCAGTCTCATATTGAAAGACAACCTGCTCAGGCGTCCGATCTTAATCTACAGCCTGATATTGAAAGAGGAGCTGCTCCGGTGTCCGATTTTAACAAATGGTCTTATTATATTGAAAAAGGAGTAGGAAGGATTGGAGTCACATATGCCCGCGAGTTCAATATCTCATGCAAAGAGAAGCCGCTTACCCTTAATGATGTAGTGTTGCAGGCTACTGAGAACCTAAATCAACGGTATATTATTGGCAAGGGAGGACATGGTATTGTGTACAAAGCCATAATTGGTCAACAGGTTTTTGCCGTAAAGAAGGTTGAATTTGGATGGAACAAGAAAAAGCGGCTAAGTATCATGCGCAACGAAGTTGAAGTCCTTGGGATGTTTAAGCATCGAAATTTGATCCAACACGAAGACTACTGGATTGGAGAGGAATATGGTTTAATCTTGTATGAATTCATGGAAAATGGAAGCCTTCATGATATTTTGCATGAAAAGAAACCCCCACCACCCTTAACATGGAATGTTCGGTGTAAAATAGCAGTTGGAATTGCTCAAGGAGTAGCATATCTGCATTATGACTGTGTTCCAAGAATAGTGCACCGAGACATCAAACCAAAGAACATACTTGTTGACGACAATATGGAGCCTATTATAGCTGATTTTGGCACTGCCCTATGTAAGCAGCTGTTTGAGGATTCTAATAGTCATTCTAAAACTAGGAAAATGCTTTCGTCGCATGTTGTTGGTACTCTTGGCTATATTGCACCGGAGAATGCATATGTTATTGTGCCAGGAAGAAAATCTGATGTATATAGCTACGGAGTTGTTTTGCTTGAGCTAATAACCAGAAAGAAATCGTTAGTTCCCTCTTTGAATGATGAGGCAGAGGAGACCCCCTTAGTGATCTGGGCTAGATCTGTATGGCTGAAAACAGGTAAAACTAAGATTGTTGATCCTTACCTTGCAAGTGCATTTCCCAGTTCAGTAGCACTAGCCAAGCAAGTTTCTGCAGTCCTTTCATTGGCATTACGATGCATAGAGAAGGATCCACGAAAGAGGCCGACCATGAAAGGTGTTATTGGTTTTTTTAATAAGAACTTGTTTAAGCTGAGGTGTGATGAGGTTCAATATGCTGATGGACTTGCAATTAAGCTGATGGGAAATGGTAAGATGCAGGTAGAAAAGGTTGTCGGGTTGAATTTTATCTATATCTTGAAGCTGAACCAGATTGTAAACATAACATTGAATCCAATTGGTTTTGCTCTTACTTCTGATGGATTGACTCTTTTGTCACTCTTGACACACTGGACCTTTGTTCCTCCTCTCATCAACTCTAGTTGGAAGGCTTCTGATTCAACTCCATGCTCATGGGTTGGTGTTCAATGCGACCGTGCACAAAATGTAACTTCCATTAACCTCACTAATCATGGGATTTTTGGTCAACTTGGGACAGAAATTGGAAACCTTCATCACTTGAAGACCCTTGCGTTGTTTGGAAATGGTTTCTCAGGAAAAGTGCCTTCAGAGTTAAGCAACTGTAGTTTCCTTGAGTATTTAGACCTTTCTGAGAATAGATTCAGTGGAAAGATACCATATAGATTGAAGAAGTTACATATTTTACAGTTTATGAGTTTGTCTTCCAATCTGCTTATCGGGGAAATTCCAGATTCCTTGTTTCAAATTCCATCCTTGGAAGAAGTGAGTCTGCACAGTAACCTTCTTAGTGGTCCTATCCCGAACAATATTGGAAACTTGACTCATCTGTTGAGGTTGTATCTATATGGTAATCGGTTGTCAGGGACTATTCCTTCATCTCTTGGTAACTGCAGTAAACTTGAGGACCTTGAATTGTCTTTCAATAGTTTGAGAGGCGAAATTCCGGTCAGTATTTGGAGAATTTCAAGTCTTGAGCACATCTTGGTTCACAACAACAGCCTCTCTGGGGAACTACCTTTCGAGATGACAAAGCTCAAGTATTTAAAAAATATCTCATTGTTTGACAATCAGTTCTCAGGAGGCATACCTCAAAGCTTGGGAATCAATAGCAGCATAGCAAAGTTAGATTGTACGAATAACAAGTTCAGTGGTAATATCCCACCAAATCTTTGCTTTAGAAAGCATTTGTTAGTGCTCAATATGGGAATCAATCAACTTCAAGGTGGCATACCGTCTGATGTAGGAAGATGTGCAACTCTAAGGAGGTTGTTTCTCAATGAAAATAATTTCACCGGGTCGCTTCCTGATTTTGAAAGTGATCTGAACCTGAAATACATGGACATAAGCAAAAACAATATCAGTGGACCAATTCCATCAAGTTTGGGAAATTGCACAAAGCTTACATACATTAATTTGTCAAGGAACAAATTTGCACGGCTCATTCCATCGGAGCTTGGAAACCTTGCGGATCTTGTGATTTTGGATCTTTCTCACAACAACTTGGAAGGTCCTCTGACACTTCAGCTGTCGAATTGTACTAAAATGGATCGTTTTGATGTGGGATTTAATTTCCTGAACGGATCACTCCCATCAAGTTTGAGAAGTTGGACAAACATAACCACATTGATATTAAGTGAAAATTACTTCACAGGAGGTATCCCAGGGTTTTTGGAAAATTTTAGCAACATTTGTGAGTTACAATTTGGTGGAAATTTGTTTGGAGGAAAAATTCCTCAATCGATGGGAAAATTGCATAATCTGTTCTATGGATTGAATCTGAGTGCTAATGGATTGACAAGTGGCATTCCTTCAGAAATTGGTTTACTAGGACTGCTGCAAAATCTGGATATATCTTTAAACAATTTGACAGGAAGCTTACATGAACTTCAAGGTCTTGGGTCATTTGTTGAATTCACTTCATCATTAAATGTTTCTTACAATCACTTCAATGGTTGTGTACCTACAAGTCTAATAAATTTATTGAATTCCTCACCATCATCATTTATAGGTAATCCAATACTTCTTTCAAAAAAAAAAAGGTATCAGTAA 5043 0.3849 MTRISCSSKKFTIFLLIISFLHGATSLTSDGLTLLSLLTHWTFVPPLINSTWNASDSNPCSWVGVQCDHTNNVISISLTGHGIFGQLGPQIENLYHLQKLVLLGNGFSGKVPLELSNCSFLEYLDLSENRFSGNIPYSLKKLQSLKFMRLSSNLLTGEIPDSLFEIQSLEEVSLHNNLLSGNIPTNIGNLTHLLRLYLHGNMFSGTIPSSLGNCSKLEDVDLSFNRLRGKIPVSIWRIQSLVHILVHNNSLFGELPLEMTNLKCLKNVSLFENQFSGIIPQSLGINSSLVKLDGMNNKFSGNIPPNLCFGKHLLELNMGINQLKGVIPSDIGRCATLRRLFLNDNNFTGSLPDFESNLNLKYMDISKNNIGGPIPSSLGNCTYLTYINLSRNKFAGFIPSELGNLMNLVILDLAHNNLEGPLPLRLSNCTKMDRFDVGFNFLNGSLPSSLRSWAHITTLIFRENYFTGGIPEFLTEFSNLRELQLGRNLLRGKIPRSIGALHNLFYGLNLSSNGLTGSIPSEIGKLGLLQSLDISLNNLTGSIYALESLVSLIEVNVSYNLFNGSVPTGLMKLLNSSPSSFMGNPLLCISCLSCIETSYINPCVYKSTDHKGINNVQIVLIELGSSIFISAVLLIMIRVYLLKRYKQEFKMSCSPVVLVLKAMAKLYDCYNIGKAIVCKTQRASNIKQQSHIERQPAQASDLNLQPDIERGAAPVSDFNKWSYYIEKGVGRIGVTYAREFNISCKEKPLTLNDVVLQATENLNQRYIIGKGGHGIVYKAIIGQQVFAVKKVEFGWNKKKRLSIMRNEVEVLGMFKHRNLIQHEDYWIGEEYGLILYEFMENGSLHDILHEKKPPPPLTWNVRCKIAVGIAQGVAYLHYDCVPRIVHRDIKPKNILVDDNMEPIIADFGTALCKQLFEDSNSHSKTRKMLSSHVVGTLGYIAPENAYVIVPGRKSDVYSYGVVLLELITRKKSLVPSLNDEAEETPLVIWARSVWLKTGKTKIVDPYLASAFPSSVALAKQVSAVLSLALRCIEKDPRKRPTMKGVIGFFNKNLFKLRCDEVQYADGLAIKLMGNGKMQVEKVVGLNFIYILKLNQIVNITLNPIGFALTSDGLTLLSLLTHWTFVPPLINSSWKASDSTPCSWVGVQCDRAQNVTSINLTNHGIFGQLGTEIGNLHHLKTLALFGNGFSGKVPSELSNCSFLEYLDLSENRFSGKIPYRLKKLHILQFMSLSSNLLIGEIPDSLFQIPSLEEVSLHSNLLSGPIPNNIGNLTHLLRLYLYGNRLSGTIPSSLGNCSKLEDLELSFNSLRGEIPVSIWRISSLEHILVHNNSLSGELPFEMTKLKYLKNISLFDNQFSGGIPQSLGINSSIAKLDCTNNKFSGNIPPNLCFRKHLLVLNMGINQLQGGIPSDVGRCATLRRLFLNENNFTGSLPDFESDLNLKYMDISKNNISGPIPSSLGNCTKLTYINLSRNKFARLIPSELGNLADLVILDLSHNNLEGPLTLQLSNCTKMDRFDVGFNFLNGSLPSSLRSWTNITTLILSENYFTGGIPGFLENFSNICELQFGGNLFGGKIPQSMGKLHNLFYGLNLSANGLTSGIPSEIGLLGLLQNLDISLNNLTGSLHELQGLGSFVEFTSSLNVSYNHFNGCVPTSLINLLNSSPSSFIGNPILLSKKKRYQ* 1681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0880 1680 Pfam Protein kinase domain 766 1044 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g0880 1680 SUPERFAMILY RNI-like 1345 1666 - -
Mal8g0880 1680 SUPERFAMILY Protein kinase-like (PK-like) 749 1046 IPR011009 -
Mal8g0880 1680 Gene3D Transferase(Phosphotransferase) domain 1 839 1061 - -
Mal8g0880 1680 Pfam Leucine rich repeat 1440 1499 IPR001611 GO:0005515
Mal8g0880 1680 Pfam Leucine rich repeat 359 418 IPR001611 GO:0005515
Mal8g0880 1680 PANTHER OS08G0446200 PROTEIN 1095 1673 - -
Mal8g0880 1680 PANTHER OS08G0446200 PROTEIN 5 1059 - -
Mal8g0880 1680 Gene3D Ribonuclease Inhibitor 1440 1678 IPR032675 -
Mal8g0880 1680 SUPERFAMILY L domain-like 186 569 - -
Mal8g0880 1680 SMART serkin_6 762 1049 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g0880 1680 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Mal8g0880 1680 Pfam Leucine rich repeat N-terminal domain 1110 1149 IPR013210 -
Mal8g0880 1680 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 1095 1673 - -
Mal8g0880 1680 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 5 1059 - -
Mal8g0880 1680 Gene3D Phosphorylase Kinase; domain 1 743 838 - -
Mal8g0880 1680 Gene3D Ribonuclease Inhibitor 1111 1264 IPR032675 -
Mal8g0880 1680 Gene3D Ribonuclease Inhibitor 30 182 IPR032675 -
Mal8g0880 1680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 884 896 IPR008271 GO:0004672|GO:0006468
Mal8g0880 1680 Gene3D Ribonuclease Inhibitor 285 360 IPR032675 -
Mal8g0880 1680 Gene3D Ribonuclease Inhibitor 1365 1439 IPR032675 -
Mal8g0880 1680 ProSiteProfiles Protein kinase domain profile. 762 1054 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g0880 1680 SMART LRR_typ_2 1271 1295 IPR003591 -
Mal8g0880 1680 SMART LRR_typ_2 1223 1247 IPR003591 -
Mal8g0880 1680 SMART LRR_typ_2 1175 1199 IPR003591 -
Mal8g0880 1680 SMART LRR_typ_2 190 214 IPR003591 -
Mal8g0880 1680 SMART LRR_typ_2 142 166 IPR003591 -
Mal8g0880 1680 SMART LRR_typ_2 477 501 IPR003591 -
Mal8g0880 1680 SMART LRR_typ_2 1486 1510 IPR003591 -
Mal8g0880 1680 SMART LRR_typ_2 405 429 IPR003591 -
Mal8g0880 1680 Gene3D Ribonuclease Inhibitor 1265 1363 IPR032675 -
Mal8g0880 1680 Gene3D Ribonuclease Inhibitor 183 282 IPR032675 -
Mal8g0880 1680 SUPERFAMILY L domain-like 1132 1388 - -
Mal8g0880 1680 Gene3D Ribonuclease Inhibitor 361 599 IPR032675 -
Mal8g0880 1680 SUPERFAMILY L domain-like 51 307 - -
Mal8g0880 1680 ProSitePatterns Protein kinases ATP-binding region signature. 768 790 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0880 Mal-Chr8 12906034 12920782 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0880 105 684 Receptor kinase-like Gene Family AT1G73080 46.206 5.60e-140 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mal8g0880 Pkinase 1.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0880 - - mtr:MTR_5g087340 1921.36