Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0879 ATGCATCTCAACAAAAGGATTTCTAATAAAAGAGGAGGAGGAAGGAATGGATTCATGTATGATTATGAAGTAAGGACTCCAGTGGAAAGGAAGCTGCCAGATCTTCACGAGCAAGTGTTGGAGGCTACCGAGAACTTAAATGATCGGTGTATTATTGGCAGAGGAGCACATGGTATTGTGTACAAAGCTATAATTTGTGAAACTGTTTGTGCTGTAAAGAAGGTTGAATTCGGATGGAACAAGCAAAAACGGCTAAGTATCATGCACAACGAAGTTGAAGTCCTTCAAATGTTTAACCATCGAAATTTAATCAAATGTTGGGACTACTGGATTGGAAATGACTATGGTTTAGTAATATATAAATGCATGGAAAATGGAAGCCTTTATGATATTTTGCATGAAAAGAAACCCGCACCACTCCTAACTTGGAACACTCGGTTTAAGATAGCTGTTGGAATTGCTCAAGGACTATCTTATCTACATTATGATTGTGTTCCTCCAATAGTGCACCGAGACATCAAACCAAAGAACATACTTGTTGATGAAAATATGGAGCCTATTATAGCTGATTTTGGCACTGCCCTATACAGTAAGTTGTTTGACGATTCTTCTAGTCATTCTGAAACCAGGAAAACGCTTTCGTCGCGTGTTGTTGGTACCCCTGGCTATATTGCACCGGAGAATGCATATGATATAGTGCCGGGAAGAAAGTCTGATGTATATAGCAACGGAGTTGTTTTGCTCGAGCTAATAACCAGAAAGAAATTATTAGTTCCCTCTATGAGTGATGAGGCAAAGGAGACCCACATAGTGACCTGGGCTAGATATGTATTGATGGACACAGACAAAATTGAGAACATTGTTGATCCATACCTTGTAAGTGAATTTCCCAATTCAATAACACTAGCCAAGCAAGTCAATGCAGTGCTTTCGTTGGCATTACAATGCACAGAGAAGGATCCACGAAAGAGGCCGACCATGAAAGGTGTTATTGGTTTTTTTAATAAGAACTTGTGTAAGCTGATGTGTGATGAGGTGCAATATGGTTATGGACTTGTAATTAAACTCATGGGAAATGGTAAGATTCATTCTGTAAAATTTGTCAGGGTAGCTGCTCTAATTCTTCCAAAAATAACCTATGCTTGGTCTAGTTTGATCTTCATTCCCTCTATTACTGGTCCAATACTTACCAAACCTTTTAACTGGTTTTTCCTATCGTGTTGGGGTCAATATAGACACTTGCAGAAATCCTTGTGCTCACAGACAAAATCATACTACTCTATAAACACGGATCAAACCGAGGCCATTGTCCAAATTAGTGAATAG 1326 0.3899 MHLNKRISNKRGGGRNGFMYDYEVRTPVERKLPDLHEQVLEATENLNDRCIIGRGAHGIVYKAIICETVCAVKKVEFGWNKQKRLSIMHNEVEVLQMFNHRNLIKCWDYWIGNDYGLVIYKCMENGSLYDILHEKKPAPLLTWNTRFKIAVGIAQGLSYLHYDCVPPIVHRDIKPKNILVDENMEPIIADFGTALYSKLFDDSSSHSETRKTLSSRVVGTPGYIAPENAYDIVPGRKSDVYSNGVVLLELITRKKLLVPSMSDEAKETHIVTWARYVLMDTDKIENIVDPYLVSEFPNSITLAKQVNAVLSLALQCTEKDPRKRPTMKGVIGFFNKNLCKLMCDEVQYGYGLVIKLMGNGKIHSVKFVRVAALILPKITYAWSSLIFIPSITGPILTKPFNWFFLSCWGQYRHLQKSLCSQTKSYYSINTDQTEAIVQISE* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0879 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Mal8g0879 441 Gene3D Transferase(Phosphotransferase) domain 1 123 344 - -
Mal8g0879 441 SMART serkin_6 46 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g0879 441 ProSiteProfiles Protein kinase domain profile. 46 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g0879 441 Gene3D Phosphorylase Kinase; domain 1 28 121 - -
Mal8g0879 441 PANTHER OS08G0446200 PROTEIN 30 344 - -
Mal8g0879 441 Pfam Protein kinase domain 51 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g0879 441 SUPERFAMILY Protein kinase-like (PK-like) 35 331 IPR011009 -
Mal8g0879 441 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 30 344 - -
Mal8g0879 441 ProSitePatterns Protein kinases ATP-binding region signature. 52 74 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0879 Mal-Chr8 12904512 12905963 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0879 35 331 Receptor kinase-like Gene Family AT1G73080 48.355 8.13e-81 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mal8g0879 Pkinase 2.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0879 - - mtr:MTR_5g087370 694.115