Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0831 ATGTCTTCATCTTCTCATACTAATAATGAGTTAAAAAAAGGACCATGGTCAAAAGAAGAGGATGAATTATTAAAAGCATATGTGACAAAATATGGAGAGAAAAATTGGAATACGGTGTCAAAAAATGCAGGGCTCAATAGAGATGGTAAAAGTTGTCGATTTAGATGGTATAATCACTTACACTCAAAAGTGAAAAAAGGTTCATTTAATAAAGAAGAAGAAGAAGAAAAAGTGCTTCAGTTATATACTAAGTTTGGTGGATTATGGTCTAAAATGGCTGCAGAGTTGCCTGGAAGAACCGATAATGCCATCAAGAATTTTTGGAATTCAAGAAAAAGAAAACGTGAAAGGCGTGGCCAACAAGTTGATATTGGAGAAAGTAGTTTGGGTGGTTCGAGTAGCCAACAAGTTGATGATTTACAAGAAGAGGAATTTAATATACCTGAAGTGAAATTTAGGAAAGACAATAGCATTGGAACTTCTGGTATACCTATGGCAATGCAATCAAATCTGCCTCCACTCCCTATGAAGATTCAATGTCAGATGTCAGAATCAATTTCTCCATATAAAAGTGATGCTAGTCGCGTGCATTCCTCTACTACAAATTTAATTGATGAAAAAGGGAAGAAGCCAATTTATTTGGAGAACAAAGTTGAAGCAAACCATAGCAACTTAATGGATCCAAATGATTGGTTTGACGTCAGTTCATCTAAGACAAATTTGGTTGATGCCTTAAACAAAATTCTAATTGGAGAAGGCATAGATGGGGATCTTTTGTTTGACTTCAGTTCATTAGACAATGATGATGCTAGTCGTGTGCATTCGTCTAAGATAAATTTTGTTGATGAAAAAGGAAAAAAGCCAATTTCTTTTGAGAATGATGTTGAAGAAAACCCTGGTGACTTAATGGATTCGGATCTTTTGTTTGACTTCAATGCATTAGACAATGACAATGACAATCAATAA 966 0.3458 MSSSSHTNNELKKGPWSKEEDELLKAYVTKYGEKNWNTVSKNAGLNRDGKSCRFRWYNHLHSKVKKGSFNKEEEEEKVLQLYTKFGGLWSKMAAELPGRTDNAIKNFWNSRKRKRERRGQQVDIGESSLGGSSSQQVDDLQEEEFNIPEVKFRKDNSIGTSGIPMAMQSNLPPLPMKIQCQMSESISPYKSDASRVHSSTTNLIDEKGKKPIYLENKVEANHSNLMDPNDWFDVSSSKTNLVDALNKILIGEGIDGDLLFDFSSLDNDDASRVHSSKINFVDEKGKKPISFENDVEENPGDLMDSDLLFDFNALDNDNDNQ* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0831 321 CDD SANT 72 112 IPR001005 -
Mal8g0831 321 Gene3D - 68 136 - -
Mal8g0831 321 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mal8g0831 321 Gene3D - 12 65 - -
Mal8g0831 321 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 72 116 IPR017930 -
Mal8g0831 321 ProSiteProfiles Myb-like domain profile. 72 112 IPR001005 -
Mal8g0831 321 MobiDBLite consensus disorder prediction 110 140 - -
Mal8g0831 321 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Mal8g0831 321 Pfam Myb-like DNA-binding domain 16 75 - -
Mal8g0831 321 MobiDBLite consensus disorder prediction 125 140 - -
Mal8g0831 321 CDD SANT 15 60 IPR001005 -
Mal8g0831 321 PANTHER MYB DNA-BINDING DOMAIN PROTEIN 1 228 - -
Mal8g0831 321 SMART sant 12 62 IPR001005 -
Mal8g0831 321 SMART sant 65 114 IPR001005 -
Mal8g0831 321 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 64 IPR017930 -
Mal8g0831 321 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 1 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0831 Mal-Chr8 12301981 12303493 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0831 11 153 MYB Transcription Factor Family AT2G32460 48.252 2.59e-40 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal8g0831 Myb_DNA-bind_6 3.2e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0831 K09422 - mtr:MTR_5g088610 244.202