Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0820 ATGGGTTCCCAAGAGAACGAAGACTGTTTGCCCCCACCACCTCCCATTGTTCCCCCAGATGTTGAACCAATCAAGATTGAACCACAGATAGTCAAGAAAAAGCTTCCCACCAAGGTTCCAATGGCAAGGCGTGGACTGGGGTCTAAGGGAACTAAACTGCCTTTGCTTACAAATCACTTTAAAGTGAATGTTACTAACACTGATGGCTATTTCTTCCAGTACAGTGTTGCTCTTTTTTATGAAGATGGACGCCCTGTTGAAGGGAAGGGTTCTGGTAGGAAGATACTTGACAGAGTCCAAGCAACTTATGATTCCGAGCTTAATGGGAAAGACCTCGCTTATGATGGGGAGAAGACTCTGTTTACGATTGGCTCACTTGCTCAGAACAAGCTTGAGTTCACTGTTGTTCTTGAAGATGTCACTTCAAACAGGAACAATGGGAACGCCAGCCCTGATGGTCACGGAAGCCCAAATGACATTGATAGGAAGAGGATAAAAAAATCCTACCGATCAAAGACCTACAAAGTTGAAATCAGCTTTGCCTCAAAGATTCCTCTGCAGGCCATCGCCAATGCCTTAAAGGGACATGAAACTGAGAATTATCAAGAAGCCATTAGGGTTCTTGACATTATCTTGAGGCAACATGCTGCCAAACAGGGCTGTCTGCTGGTTCGCCAAAATTTCTTCCACAATGACCCAAAGAATTTCACAGATGTAGGAGGTGGTGTTCTTGGATGCAGAGGGCTGCATTCCAGCTTCAGAACCACACAAAGTGGGCTGTCTTTGAATATAGATGTGTCAACAACTATGATTGTCCGTCCTGGGCCTGTGGTTGACTTCCTGATTGCAAACCAGAATGTGAGAGATCCTTTCAGTCTTGACTGGAATAAGGCTAAAAGGACTCTGAAGAATTTGAGGATCACTACTACCCCAACCAACCAAGAGTACAAGATTACTGGTTTGAGTGAAATGCCTTGCAAAGACCAGCTGTTTACTTTGAAGAAGAGAGGTGCTGTCCCTGGGGAAGATGATACAGAGGAGATCACAGTTTACGATTATTTTGTTAACCGCCGAAAAATTTCTCTGCAGTACTCAGCTGATCTTCCATGTATTAATGTCGGGAAGCCAAAACGACCTACTTATGTCCCAATTGAGCTATGCTCATTGGTATCCCTGCAACGTTATACCAAAGCCCTGTCCACTCTTCAACGGTCATCCCTTGTGGAAAAGTCTAGGCAGAAGCCTCAGGAACGGATGAAGGTCTTGCAGGATGCCCTAAAAACAAGTGATTATGGCTCTGAACCCATGCTACGTAACTGTGGCATTTCAATAACTTCTGGGTTCACACAAGTTGATGGGAGGGTTTTGCAGGCTCCAAGGTTGAAGTTTGGCAATGGGGAAGATTTCAATCCCAGAAATGGGAGATGGAACTTCAACAACAAGAAAATTGTGCAACCTGTTAAGATAGAGAAATGGGCTGTGGTGAACTTTTCTGCTCGATGTGATACGCGAGGACTTGTGAGAGATCTGATAAAATGTGGAGGAATGAAAGGAATTCTTGTTGAACAACCTTTTGATGTATTTGAAGAAAATGGCCAGTTTAGGCGTGCTCCACCTGTGGTAAGGGTTGAGAAAATGTTTGAGCATGTTCAGTCCAAACTTCCTGGGGCTCCCAAGTTTCTCCTCTGTCTGCTTCCTGAGAGGAAGAACTCTGATCTTTATGGTCCATGGAAGAAGAAGAATCTTGCTGAGTTTGGAATTGTTACTCAGTGCATAGCTCCTACGAGGGTAAATGACCAGTATCTGACCAACGTTTTACTGAAGATCAATGCTAAGCTTGGTGGGATGAATTCTTTGTTAGGTGTTGAACACTCTCCATCTATCCCTATTGTGTCCAAAGCTCCAACTCTCATTTTGGGCATGGATGTTTCTCATGGTTCTCCTGGACAAACTGAAATTCCTTCAATTGCTGCGGTTGTAAGCTCGAGGCAATGGCCACTGATATCTAAATACAGGGCATGCGTCCGTACCCAGGGGGCAAAGGTTGAAATGATTGACAACCTGTTCAAGCCAGTGTCTGAAAAGGAAGATGAAGGAATCATAAGGGAACTTTTGATTGATTTCTATACGAGTTCTGGGAACAGGAAGCCAGACAATATAATCATTTTCAGGGATGGTGTCAGTGAGTCCCAGTTCAACCAAGTTTTGAACATTGAACTAAGCCAAATCATTGAGGCCTGCAAATTTCTGGATGAAACTTGGAACCCCAAGTTTCTGGTGATTGTTGCCCAGAAGAATCATCACACGAAATTCTTTCAACCTGGGTCTCCTGATAATGTGCCTCCTGGAACTGTTGTGGACAACAAAATTTGCCATCCTAGGAATTATGATTTCTATATGTGCGCTCATGCAGGAATGATTGGTACCAGTAGGCCAACTCATTATCATGTCCTTTTGGATGAGATTGGCTTTTCTCCTGATGATCTTCAAGAGCTTGTGCACTCTCTTTCATATGTTTATCAGCGGAGCACTACTGCTATCTCAGTTGTTGCTCCCATCTGCTACGCACACTTGGCTGCTTCTCAAGTTGGACAATTCATGAAGTTCGAGGATAAGTCAGAAACTTCATCTAGCCATGGTGGTACTAATATCAACGCCTCCCCTATTCCTCAGTTGCCCAAGTTGCAGGAGAAAGTCTGCAATTCCATGTTTTTTGTCTGA 2721 0.4403 MGSQENEDCLPPPPPIVPPDVEPIKIEPQIVKKKLPTKVPMARRGLGSKGTKLPLLTNHFKVNVTNTDGYFFQYSVALFYEDGRPVEGKGSGRKILDRVQATYDSELNGKDLAYDGEKTLFTIGSLAQNKLEFTVVLEDVTSNRNNGNASPDGHGSPNDIDRKRIKKSYRSKTYKVEISFASKIPLQAIANALKGHETENYQEAIRVLDIILRQHAAKQGCLLVRQNFFHNDPKNFTDVGGGVLGCRGLHSSFRTTQSGLSLNIDVSTTMIVRPGPVVDFLIANQNVRDPFSLDWNKAKRTLKNLRITTTPTNQEYKITGLSEMPCKDQLFTLKKRGAVPGEDDTEEITVYDYFVNRRKISLQYSADLPCINVGKPKRPTYVPIELCSLVSLQRYTKALSTLQRSSLVEKSRQKPQERMKVLQDALKTSDYGSEPMLRNCGISITSGFTQVDGRVLQAPRLKFGNGEDFNPRNGRWNFNNKKIVQPVKIEKWAVVNFSARCDTRGLVRDLIKCGGMKGILVEQPFDVFEENGQFRRAPPVVRVEKMFEHVQSKLPGAPKFLLCLLPERKNSDLYGPWKKKNLAEFGIVTQCIAPTRVNDQYLTNVLLKINAKLGGMNSLLGVEHSPSIPIVSKAPTLILGMDVSHGSPGQTEIPSIAAVVSSRQWPLISKYRACVRTQGAKVEMIDNLFKPVSEKEDEGIIRELLIDFYTSSGNRKPDNIIIFRDGVSESQFNQVLNIELSQIIEACKFLDETWNPKFLVIVAQKNHHTKFFQPGSPDNVPPGTVVDNKICHPRNYDFYMCAHAGMIGTSRPTHYHVLLDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGQFMKFEDKSETSSSHGGTNINASPIPQLPKLQEKVCNSMFFV* 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0820 906 Pfam Piwi domain 561 868 IPR003165 GO:0003676
Mal8g0820 906 ProSiteProfiles PAZ domain profile. 299 391 IPR003100 GO:0005515
Mal8g0820 906 MobiDBLite consensus disorder prediction 142 164 - -
Mal8g0820 906 ProSiteProfiles Piwi domain profile. 560 868 IPR003165 GO:0003676
Mal8g0820 906 SMART Piwi_a_2 560 868 IPR003165 GO:0003676
Mal8g0820 906 SUPERFAMILY PAZ domain 269 431 IPR036085 GO:0005515
Mal8g0820 906 Pfam Mid domain of argonaute 470 503 IPR032473 -
Mal8g0820 906 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 6 905 - -
Mal8g0820 906 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 6 905 - -
Mal8g0820 906 SUPERFAMILY Ribonuclease H-like 544 866 IPR012337 -
Mal8g0820 906 Gene3D - 455 621 - -
Mal8g0820 906 Pfam Argonaute linker 2 domain 417 463 IPR032472 -
Mal8g0820 906 Gene3D - 627 906 IPR036397 GO:0003676
Mal8g0820 906 Pfam PAZ domain 278 407 IPR003100 GO:0005515
Mal8g0820 906 CDD PAZ_argonaute_like 274 390 - -
Mal8g0820 906 CDD Piwi_ago-like 435 860 IPR045246 -
Mal8g0820 906 SMART DUF1785_2 222 274 IPR014811 -
Mal8g0820 906 Pfam Argonaute linker 1 domain 224 272 IPR014811 -
Mal8g0820 906 Pfam N-terminal domain of argonaute 52 212 IPR032474 -
Mal8g0820 906 Gene3D paz domain 268 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0820 Mal-Chr8 12124927 12131207 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0820 43 905 Eukaryotic Initiation Factors Gene Family AT5G43810 34.873 1.17e-158 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0820 K11593 - gmx:100779439 1575.45