Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0818 ATGAGTTCACGCGAGAACGAAGACTGTTTTCCCCCACCACCTCCCATTGTTCCACCTAATGTTGAACTGGTAAAGAAGAATAAGCTTCCTACTAAGGTTCCAATGGCTAGGCGTGGCCTAGGGTCGAAGGGAACTAGACTGCCTTTGTTAACAAATCACTTTAAAGTGAATGTTGCTAACACTGATGGGTTTTTCTTTCAGTACAGTGTTGCATTGTTTTATGAAGACGGACGCCCTGTTGAAGGGAAAGGCGCCGGGAGGAAGATACTTGACAGAGTCCAAGAAACTTATAATTCCGAGCTTAATGGGAAAGACCTTGCTTATGACGGGGAGAAGACTCTGTTCACAATCGGCTCTCTAGCTCAGAACAAGCTCGAGTTTACTGTTGTTCTTGACGATGTCACTTCAAACAGGAACAATGCGAACACTAGCCCTGATCGGCTCAGAAGCCCAAATGACATCGATAGGAAGAGGATAAAAAAATCATACCGTTCCAAGACTTATAAAGTTGAAATCAACTTTGCTTCCAAAATTCCTCTGCAGGCCATTGCCAATGCCTTAAAGGGGCTTGAAAATGAGAATTATCAGGAAGCCATTAGGGTTCTTGATATTATCTTGAGACAACATGCTGCCAAACAGGGCTGTTTGCTCGTGCGCCAAAATTTCTTTCGCAATGACCCAAATAAATTCATTGATGTTGGAGGTGGTGTACTTGGATGCAGAGGGCTGCATTCCAGCTTCAGAACCACACAAAGTGGATTGTCTCTGAACATAGATGTGTCAACAACCATAGTTGTCCGTCCTGGACCTGTGGTTGACTTCTTGGTTGCAAACCAGGATGTGAGACAACGTTCCAATCTTGACTGGAAAAAGGCTAAAAGGACTCTGAAGAATTTGAGGATCACAGTTAGCCCATCTAACCAAGAGTACAAGATAACCGGGCTGAGTGAATTGCGGTGCAAAGACCAGCTGTTTACCCTGAAGAAGAGAGGTGCTGTCCCTGGGGAAGATGCTACAGAGGAGATCACGGTTTATGATTATTTTGCTAACCAACGAAAAATTGGTCTGCGGTACTCAGCTGATCTGCCATGTATTAATGTCGGGAAGCCAAAGCGACCTACTTATATCCCAATTGAGCTTTGCTCATTGATATCCCTGCAACGATACACCAAAGCCCTCTCCACTCTTCAACGATCCTCTCTTGTGGAAAAGTCGAGACAGAATCCTCGAGAACGGATGATGGTCTTGTCAGATGCTTTGAAAGCAAGTAACTATGGCTCTGAACCTATGTTACGTAACTGTGGCATTTCAATAACATCTGGCTTCACACAAGTTGATGGGAGGGTTTTGCAGGCTCCAAAGTTGAAGTTTGGCAATGGGGAAGATAATCCTAGAAATGGTAAATGGAACTTTAACAACAAGAAAATTGTACAACCTGTTAAGATTGAGAAATGGGCTGTGGTGAACTTTTCTGCTGAATGTGATACGCAACGACTTGTGAGAGATCTGATAAAATGTGGAGGAATGAAAGGAATTCTTGTTGAACAACCTTTTGATGTATATGAAGAAAATGGCAAGTTTAGTCGTGCTCAACCTGCGTTAAGGGTTGAGAAAATGCTTGACCATGTTCAGTCCAAACTTCCTGGGGAACCTAACTTTCTCCTCTGTCTGCTTCCTGAGAGGAAAAATTCTGATCTTTATGGTCCGTGGAAGAAAAAGACTCTTGCTGAGTTTGGAATTGTTACTCAGTGCATAGCTCCTACGAGGAAGGTAAATGACCAGTATCTGACCAATGTTTTACTGAAGATCAATGCTAAGCTTGGTGGGATGAATTCTCTCTTAGGCGTTGAACACTCTCGAACCATCCCTATTGTGTCTAAAGCTCCCACTCTCATTTTGGGCATGGATGTTTCTCATGGTTCACCTGGGCAATCTGACATTCCTTCAATTGCTGCGGTTGTAAGCTCGAGGGAATGGCCACGGATATCTAAATATCGGGCATGTGTCCGAACTCAGGGCTCGAAGGTTGAGATGATTGACAATCTGTTCAAGCCAGTGTCTAATGAGATAGATGAAGGGATTATAAGCGAAATTTTGCATGATTTCTTTCATAGTTCTGGGAGAAACCCAGACAATATCATCATTTTCAGGGATGGTGTCAGTGAGTCTCAGTTCAACCACGTTTTGAATGTTGAACTCAGCCAAATCATCGAGGCTTGTAAATTTCGTAATCGAAACTGGAACCCAAGGTTTCTTGTGATTGTTGCCCAGAAGAATCATCACACAAAGTTCTTCCAGCCTGGATCTCCGGATAAAAATGTGCCTCCTGGAACTGTCGTGGACAACAAAATTTGTCATCCTAGGAATTATGATTTCTATATGTGTGCTCATGCAGGAATGATTGGTACAAGCAGGCCAACACATTATCACGTTCTTTTGGATGAGATTGGCTTTTCTACGGATGATTTACAGGAGCTTGTGCACTCTCTATCTTATGTGTATCAGCGGAGCACCACTGCCATCTCTGTTGTTGCTCCAATCTGCTATGCACACTTGGCTGCTTCTCAAGTGGCACAGTTCATGAAGTTTGAAGATAAGTCTGAAACTTCTTCTAGCCAAGGTGGTGTCAATGCCTCCCCCATCCCACAGTTGCCAAAGTTACCTGAGAGTGTCCGTAATTCCATGTTTTTTGTCTGA 2697 0.4353 MSSRENEDCFPPPPPIVPPNVELVKKNKLPTKVPMARRGLGSKGTRLPLLTNHFKVNVANTDGFFFQYSVALFYEDGRPVEGKGAGRKILDRVQETYNSELNGKDLAYDGEKTLFTIGSLAQNKLEFTVVLDDVTSNRNNANTSPDRLRSPNDIDRKRIKKSYRSKTYKVEINFASKIPLQAIANALKGLENENYQEAIRVLDIILRQHAAKQGCLLVRQNFFRNDPNKFIDVGGGVLGCRGLHSSFRTTQSGLSLNIDVSTTIVVRPGPVVDFLVANQDVRQRSNLDWKKAKRTLKNLRITVSPSNQEYKITGLSELRCKDQLFTLKKRGAVPGEDATEEITVYDYFANQRKIGLRYSADLPCINVGKPKRPTYIPIELCSLISLQRYTKALSTLQRSSLVEKSRQNPRERMMVLSDALKASNYGSEPMLRNCGISITSGFTQVDGRVLQAPKLKFGNGEDNPRNGKWNFNNKKIVQPVKIEKWAVVNFSAECDTQRLVRDLIKCGGMKGILVEQPFDVYEENGKFSRAQPALRVEKMLDHVQSKLPGEPNFLLCLLPERKNSDLYGPWKKKTLAEFGIVTQCIAPTRKVNDQYLTNVLLKINAKLGGMNSLLGVEHSRTIPIVSKAPTLILGMDVSHGSPGQSDIPSIAAVVSSREWPRISKYRACVRTQGSKVEMIDNLFKPVSNEIDEGIISEILHDFFHSSGRNPDNIIIFRDGVSESQFNHVLNVELSQIIEACKFRNRNWNPRFLVIVAQKNHHTKFFQPGSPDKNVPPGTVVDNKICHPRNYDFYMCAHAGMIGTSRPTHYHVLLDEIGFSTDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVAQFMKFEDKSETSSSQGGVNASPIPQLPKLPESVRNSMFFV* 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0818 898 SUPERFAMILY PAZ domain 263 425 IPR036085 GO:0005515
Mal8g0818 898 CDD PAZ_argonaute_like 268 384 - -
Mal8g0818 898 Gene3D paz domain 262 389 - -
Mal8g0818 898 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 7 897 - -
Mal8g0818 898 Pfam N-terminal domain of argonaute 46 206 IPR032474 -
Mal8g0818 898 Pfam PAZ domain 272 401 IPR003100 GO:0005515
Mal8g0818 898 CDD Piwi_ago-like 429 861 IPR045246 -
Mal8g0818 898 Gene3D - 621 898 IPR036397 GO:0003676
Mal8g0818 898 Pfam Argonaute linker 1 domain 218 265 IPR014811 -
Mal8g0818 898 Pfam Argonaute linker 2 domain 411 457 IPR032472 -
Mal8g0818 898 ProSiteProfiles PAZ domain profile. 293 385 IPR003100 GO:0005515
Mal8g0818 898 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 7 897 - -
Mal8g0818 898 Gene3D - 449 615 - -
Mal8g0818 898 SMART Piwi_a_2 553 862 IPR003165 GO:0003676
Mal8g0818 898 ProSiteProfiles Piwi domain profile. 553 862 IPR003165 GO:0003676
Mal8g0818 898 Pfam Piwi domain 554 862 IPR003165 GO:0003676
Mal8g0818 898 Pfam Mid domain of argonaute 463 498 IPR032473 -
Mal8g0818 898 SMART DUF1785_2 216 268 IPR014811 -
Mal8g0818 898 SUPERFAMILY Ribonuclease H-like 537 860 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0818 Mal-Chr8 12112559 12118267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0818 37 897 Eukaryotic Initiation Factors Gene Family AT5G43810 34.251 5.90e-156 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0818 K11593 - gmx:100779439 1428.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2321 2 28888165 28894607 Mal8g0818 8 12112559 12118267 PCT