Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0796 ATGGAGCATCCATCTTACAACGGTTCCAGAGTCAAGCTCGTGATTAGCTATGATGGAATAATTCAACCTAGAGTTACTAATTTATATGATGGTCATCGATATTGCTACATCGGCGGCGACAACAAAATCATCACCGTCGATCGTAATATCAAATTGTTTAACCTCAAGGCAAAGCTTTCTACATTGACGTGTTCTAATGTTCTTTACTTCAAGTATCAACTCCCTGGTAAAGATCTTGATGCTTTGATATCGGTCTATAACGAAGAAGATTTGGATCGTATGATGTTCAAGTATGATCGTATTTGTCGCGTTTCACCAAAGCCTGTAAGGCTCAGGGTCTTCCTCTTCCTTCTCTCTGTTAACAACAACAACAACAACAACAACAACAACACATCTTCTGATTCTTTGGCTTCCGGTATCAATCTCACACGGTTGTTGCATAATTCTGCTCATGTTCTGCCGTTGAAAGATTCATCTCCTGCTACTTCGGCTCCACCTCCTTTGTTGATGATGAGTCAGGAGGAATTCCCAGCCACTTCTCTAGATTTCGCGAAGAAGGATACAATTATTAAAACTGAGATGAATGAATTTCACAAACTGCATGTCAAGAATGATGAGTTCGAAGATATTCTAACATTGTGTTTTAAGCGTTATTATCCAAAGTCTAATGTAGCTTTTTTAAGATTCTTTTTGAAGTGTAATTAA 705 0.383 MEHPSYNGSRVKLVISYDGIIQPRVTNLYDGHRYCYIGGDNKIITVDRNIKLFNLKAKLSTLTCSNVLYFKYQLPGKDLDALISVYNEEDLDRMMFKYDRICRVSPKPVRLRVFLFLLSVNNNNNNNNNNTSSDSLASGINLTRLLHNSAHVLPLKDSSPATSAPPPLLMMSQEEFPATSLDFAKKDTIIKTEMNEFHKLHVKNDEFEDILTLCFKRYYPKSNVAFLRFFLKCN* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0796 234 Gene3D - 34 117 - -
Mal8g0796 234 SUPERFAMILY CAD & PB1 domains 33 122 - -
Mal8g0796 234 PANTHER OS05G0427100 PROTEIN-RELATED 9 190 - -
Mal8g0796 234 SMART PB1_new 29 116 IPR000270 GO:0005515
Mal8g0796 234 Pfam PB1 domain 34 114 IPR000270 GO:0005515
Mal8g0796 234 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 9 190 - -
Mal8g0796 234 CDD PB1_UP2 16 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0796 Mal-Chr8 11881201 11881905 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0796 10 116 MAP Kinase Kinase Kinase AT3G46920 39.815 9.23e-15 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0796 - - mtr:MTR_5g088590 215.698