Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0793 ATGAAGCATCCACTTTTCAACGGTTCTAGAGTCAAGCTCATGATTAGCTATGATGGAATGATTCAACCTAGAATTACTGATTCGTATGACGGTCATCGCTATTGCTACATTGACGGGGACAACAAAATCATCACCGTTGATCGTAACATCAAATTTTCCAACCTCATGGAAAAGCTTTCTACATTGACGTTTTCTTATGCTGTTTACTTCAAGTATCAACTCCCTGGTAGAGATCTCGATGCTTTGATATCGGTCTGTAACCAAGAAGATTTGGATCGTATGATGTTCAAGTATGATCGTATTTGTCGCGTTTCACCAAAGCCTGTAAGGTTCAGGGTCTTCCTCTTCCTTCTCTCTGTTAACAACAACTCATCTTCAGATTCTTTGGCTTCTGGTATCAATCACACACAGTTGTTGCATAAATCTGCTCATGTTCTTCCGTTGAAAGATTCATCTCCTGCTACTCCACCTCCGCCATCGACGATGAGTCAGGAGGAATTCCCAGCTACTTCTCCAGATTTCGCGAAGAAGGATACAGTTACCAAAACTGAGATGAATGAATTTCACAAACTGCATGTGGATAATGATGAATTTGAAGATATTCTAAAGTTGTGTTTGAAGCGTTATTATTTTCCAAAGTGTAATGAAGTTTTCTAA 657 0.3942 MKHPLFNGSRVKLMISYDGMIQPRITDSYDGHRYCYIDGDNKIITVDRNIKFSNLMEKLSTLTFSYAVYFKYQLPGRDLDALISVCNQEDLDRMMFKYDRICRVSPKPVRFRVFLFLLSVNNNSSSDSLASGINHTQLLHKSAHVLPLKDSSPATPPPPSTMSQEEFPATSPDFAKKDTVTKTEMNEFHKLHVDNDEFEDILKLCLKRYYFPKCNEVF* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0793 218 Gene3D - 34 117 - -
Mal8g0793 218 SMART PB1_new 28 116 IPR000270 GO:0005515
Mal8g0793 218 MobiDBLite consensus disorder prediction 149 173 - -
Mal8g0793 218 PANTHER OS05G0427100 PROTEIN-RELATED 9 184 - -
Mal8g0793 218 SUPERFAMILY CAD & PB1 domains 33 125 - -
Mal8g0793 218 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 9 184 - -
Mal8g0793 218 Pfam PB1 domain 34 114 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0793 Mal-Chr8 11867127 11867783 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0793 10 116 MAP Kinase Kinase Kinase AT3G46920 37.963 3.84e-18 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0793 - - mtr:MTR_5g088590 206.453