Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0783 ATGTCTTCATCTTCTGATACTAATAATGGGTTAAAAAAAGGAAAATGGTCAAAAGATGAGGATGAAATATTAAAAGCATACGTGAGAGAATATGGAGAAGAAAATTGGGATGCTCTGTCAAAAAATGCAGGGCTCAATAGAGATGGTAAAAGTTGTCGATTTAGATGGTATAATCACCTACATCCAAAAGTGAAAAAGGGTCCATTTAGTAAAGAAGAAGAAAAAAAAGTGCTTCAGTTATATACTAAGTTTGGTGAATTCAAATGGTCTAAAATGGCTGCGGAGATGCCTGGAAGAACCGATAATAACATCAAGAACTTTTGGAATTCAAGAGATAGAAAACGTAAAAGGCATGGTCTACAAGTTGATGATGAGTTAAATGGTGATGGACCACAAGTTGATGATGAGTTAAACGGTGATGGAGAAAGTAGTTTGGGTGACAAATTTGATATACCAGAAGTGAAATTTAGAAAATATTCAAAGAATTTGGAAGACTTAGATGTTAGTCACATGTGTTCCTCTGAGATAAATTTGGTTGATGAAAAAGGGAAGAAACCAATTTCTTTGGAGAACGGTAATGAAGCAAACCATGGTGACTTAATGGATACAGATATTTGGTTTGACTATGATTCATTTGAGAAAGACAACTACAACAAATATGGAAAAGGGGAGGAGCCAATTTCTTTGGAGAACGATGTTGAAGCAAACCATGACGACTTAATGGATCCGTATCTTTTGATTGACTTCAGTTGTTAA 756 0.3479 MSSSSDTNNGLKKGKWSKDEDEILKAYVREYGEENWDALSKNAGLNRDGKSCRFRWYNHLHPKVKKGPFSKEEEKKVLQLYTKFGEFKWSKMAAEMPGRTDNNIKNFWNSRDRKRKRHGLQVDDELNGDGPQVDDELNGDGESSLGDKFDIPEVKFRKYSKNLEDLDVSHMCSSEINLVDEKGKKPISLENGNEANHGDLMDTDIWFDYDSFEKDNYNKYGKGEEPISLENDVEANHDDLMDPYLLIDFSC* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0783 251 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 116 IPR017930 -
Mal8g0783 251 SMART sant 65 114 IPR001005 -
Mal8g0783 251 SMART sant 12 62 IPR001005 -
Mal8g0783 251 CDD SANT 68 109 IPR001005 -
Mal8g0783 251 Pfam Myb-like DNA-binding domain 16 77 - -
Mal8g0783 251 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Mal8g0783 251 MobiDBLite consensus disorder prediction 115 146 - -
Mal8g0783 251 PANTHER MYB DNA-BINDING DOMAIN PROTEIN 1 122 - -
Mal8g0783 251 ProSiteProfiles Myb-like domain profile. 61 112 IPR001005 -
Mal8g0783 251 CDD SANT 15 60 IPR001005 -
Mal8g0783 251 Gene3D - 5 65 - -
Mal8g0783 251 Gene3D - 68 119 - -
Mal8g0783 251 SUPERFAMILY Homeodomain-like 10 108 IPR009057 -
Mal8g0783 251 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 64 IPR017930 -
Mal8g0783 251 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 1 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0783 Mal-Chr8 11729401 11730594 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0783 10 170 MYB Transcription Factor Family AT2G32460 46.914 2.13e-44 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal8g0783 Myb_DNA-bind_6 1.9e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0783 K09422 - mtr:MTR_5g088640 209.149