Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0771 ATGGGAAACACTTGCAGAAAACCAGTTTGTCATGACTCCTCAACAAGTTTATTTGGAAGTACAAAGACTCAAAGTAACACAAAGCAGACTCCAAATTCTCCTGACCAGAAAACCGATTCGAAAATTTCATCATCAAATGATGAAAAATCCATCTCTAAAGATGTTAAGTCCTTCAGCTTCAATGATCTAAAGGAGGCAACTAGGAACTTCCGGCAAGAAAATTTAATCGGGGAAGGAGGGTTTGGATTTGTCTTCAAAGGATGGATAGATGAGAATACTGGTGCTCCTACAAAACCAGGAAATGGAATTGTAGTAGCCATTAAGAAGCTTAAACCAGAAAGTTTTCAAGGCCACAAGGAATGGCTTGCAGAAGTCAATTATCTAGGCCAACTTCACCATGAAAATTTGGTGAAGCTTATTGGTTACTGTTCAGAAGGTAAAAACAGGCTTCTGGTTTACGAGTTTATGCAGAAAGGAAGTTTGGAAAATCACCTATTCAGAAAAGGTGTTCAACCAATTTCCTGGATGACGCGGATCAATATTGCGATCGGTGTTGCAAGGGGACTAGCATTCTTACATTCCCTTGATGCAAATGTTATTTATCGCGATTTAAAGGCTTCCAACATTCTACTTGATTCGGATTTCAATGCCAATCTTTCGGATTTCGGTTTAGCAAGAGATGGTCCGACCGGAGATAACACTCATGTTTCAACTCGAATTATTGGAACTCATGGTTATGCCGCGCCAGAGTATGTAGCCACAGGCCATTTAACACTGAGGAGTGATGTATACAGTTTTGGCGTCGTCTTGTTAGAGTTACTAACGGGACGGCGTGTAGTCGAAGATGATAGACAGGTATACACGGAAGAAACATTGGTCGATTGGGCAATGCCTTTCTTGAGTGACAGTAGAAGAATATTGAGAATCATGGATACAAAGTTAGGTGGTCAGTATTCAAAGAAAGGAGCTCAAACTGCAGCTGCACTTGTTCTAAAGTGTCTTAATAATGATCCTAAACATAGACCAACCATGGTAAATGTTCTAGCTGCATTGGAAGCATTAAACTCCTCAAATTCATTCCCAAGGACACCAAAATCTGGAACTGATAGTCATAATTCAGTCCCAAGGACACCAAAACATGGAACTGATAATCATCATGGAACCAAGCATTCTAGTCATCATCATTCACAAAAGTCAAATACCAATAATACTAGAAAACATTGA 1224 0.3971 MGNTCRKPVCHDSSTSLFGSTKTQSNTKQTPNSPDQKTDSKISSSNDEKSISKDVKSFSFNDLKEATRNFRQENLIGEGGFGFVFKGWIDENTGAPTKPGNGIVVAIKKLKPESFQGHKEWLAEVNYLGQLHHENLVKLIGYCSEGKNRLLVYEFMQKGSLENHLFRKGVQPISWMTRINIAIGVARGLAFLHSLDANVIYRDLKASNILLDSDFNANLSDFGLARDGPTGDNTHVSTRIIGTHGYAAPEYVATGHLTLRSDVYSFGVVLLELLTGRRVVEDDRQVYTEETLVDWAMPFLSDSRRILRIMDTKLGGQYSKKGAQTAAALVLKCLNNDPKHRPTMVNVLAALEALNSSNSFPRTPKSGTDSHNSVPRTPKHGTDNHHGTKHSSHHHSQKSNTNNTRKH* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0771 407 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Mal8g0771 407 SUPERFAMILY Protein kinase-like (PK-like) 45 352 IPR011009 -
Mal8g0771 407 MobiDBLite consensus disorder prediction 357 375 - -
Mal8g0771 407 Pfam Protein tyrosine and serine/threonine kinase 73 350 IPR001245 GO:0004672|GO:0006468
Mal8g0771 407 PANTHER OS01G0588500 PROTEIN-RELATED 17 371 - -
Mal8g0771 407 MobiDBLite consensus disorder prediction 386 407 - -
Mal8g0771 407 SMART serkin_6 70 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g0771 407 Gene3D Transferase(Phosphotransferase) domain 1 156 370 - -
Mal8g0771 407 ProSitePatterns Protein kinases ATP-binding region signature. 76 109 IPR017441 GO:0005524
Mal8g0771 407 MobiDBLite consensus disorder prediction 1 48 - -
Mal8g0771 407 PANTHER TYROSINE KINASE FAMILY PROTEIN 17 371 - -
Mal8g0771 407 MobiDBLite consensus disorder prediction 8 40 - -
Mal8g0771 407 Gene3D Phosphorylase Kinase; domain 1 44 155 - -
Mal8g0771 407 CDD STKc_IRAK 76 354 - -
Mal8g0771 407 MobiDBLite consensus disorder prediction 357 407 - -
Mal8g0771 407 ProSiteProfiles Protein kinase domain profile. 70 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0771 Mal-Chr8 11599188 11601549 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0771 6 357 Glycoside Hydrolase AT3G07070 47.500 1.70e-104 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mal8g0771 PK_Tyr_Ser-Thr 1.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0771 - - gmx:102664409 635.95