Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0765 ATGTCTTCATCTTCTTCTGATACTAATAATGGGTTAAAAAAAGGAAAATGGTCAAAAGAAGAGGATGAATTATTAAAAGCATATGTGACAAAATATGGAGAGAAAAACTGGAAAACAGTGTCAAAAAATGCAGGTCTCAATAGAGATGATAAGAGTTGTCGATTTAGATGGTATAATCACTTACACTCAAAAGTGAAAAAGGGTCCATTTAGTAAAGAAGAAGAAGAAAAAGTGCTTCAGTTATATACTAAGTTTGGTGGATTATGGTCTAAAATGGCTGCGGAGTTGCCTGGAAGAACCGATAATGCCATCAAGAACTTTTGGAATTCAAGAAAAAGAAAACGTGAAAGGCGTGGCCTACAAGTTGATATTGAGTTAAATGGTGATCATGGAGAAAGTAGTTTGGGTGTTTCCAGTAGCCAACAAGTTGATGATTTACAAGAAGAGGAATTCAATATACCTGAAGTGAAATTTAGGAAAGACAATTTGCATAGAAGATATCCATCAATTTTTGATGAGAAAAATGAAAACAACTTCAGATATAGCATTGGAACTTCTGGTATACCTATGGCAATTTCTCCATATAAAAGTGGTTCATTGGAGTCTATGTTCTATACACCAAAGAACTTGGAAGGCTCAGATGTTGGTCGCGTGCATTCCTCTACTACAAATTTGGTTGATGAAAAAGGGAAGAAGCCAATTTCTTTGGAGAACGATGTTGAAGCAAATCATGACAACTTAATGCATCCGGCAGATCTTTGGTTAGGCTTCAGTTCATTATACAATGAAGATGCTAGTCGCGTGCATTCCTCTACTACAAATTTAATTGATGAAAAAGGGAAGAAGCCAATTTCTTTGGAGAACAAAGTTGAAGCAAACCATGACTACTTAATGGATCCAAATGATTGGTTTGACGTCGGTTCATCTAAGACAAATTTGGTTGATGCCTTAGACAAAGTTCTAATTGGAGAAGGCATAGATGGGGATCTTTTGTTTGACTTCAGTTCATTAGACAATGATGATGCTAGTCGTGTGCATTCGTCTAAGACAAATTTGGTTGATGAAAAAGGAAAAAAGCCAATTTCTTTTGAGAACGATGTTGAAGCAAACCCTGGTGACTTAATGGATTCGGATCTTTTGTTTGACATCAATGCATAG 1158 0.3592 MSSSSSDTNNGLKKGKWSKEEDELLKAYVTKYGEKNWKTVSKNAGLNRDDKSCRFRWYNHLHSKVKKGPFSKEEEEKVLQLYTKFGGLWSKMAAELPGRTDNAIKNFWNSRKRKRERRGLQVDIELNGDHGESSLGVSSSQQVDDLQEEEFNIPEVKFRKDNLHRRYPSIFDEKNENNFRYSIGTSGIPMAISPYKSGSLESMFYTPKNLEGSDVGRVHSSTTNLVDEKGKKPISLENDVEANHDNLMHPADLWLGFSSLYNEDASRVHSSTTNLIDEKGKKPISLENKVEANHDYLMDPNDWFDVGSSKTNLVDALDKVLIGEGIDGDLLFDFSSLDNDDASRVHSSKTNLVDEKGKKPISFENDVEANPGDLMDSDLLFDINA* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0765 385 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mal8g0765 385 Pfam Myb-like DNA-binding domain 17 77 - -
Mal8g0765 385 CDD SANT 69 112 IPR001005 -
Mal8g0765 385 CDD SANT 16 61 IPR001005 -
Mal8g0765 385 Gene3D - 11 67 - -
Mal8g0765 385 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 2 178 - -
Mal8g0765 385 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Mal8g0765 385 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mal8g0765 385 Gene3D - 69 135 - -
Mal8g0765 385 SMART sant 66 114 IPR001005 -
Mal8g0765 385 SMART sant 13 63 IPR001005 -
Mal8g0765 385 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Mal8g0765 385 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mal8g0765 385 PANTHER MYB DNA-BINDING DOMAIN PROTEIN 2 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0765 Mal-Chr8 11542300 11543833 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0765 11 122 MYB Transcription Factor Family AT2G32460 53.571 4.78e-39 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal8g0765 Myb_DNA-bind_6 1.2e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0765 K09422 - mtr:MTR_5g088610 266.159