Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0754 ATGTCTTCATCTTTTGATACTAATAAAAAAGAAAAATGGTCAAAAGAGGAGGATGAAATATTAAAAGCATACGTGAGAGAATATGGAGAAGAAAATTGGAATGCTTTGTCAAAAAATGCAGGGTTCAAGAGAGATGGTAAAAGTTGTCGATTTAGATGGTATAATCACTTACACCCAAAAGTGAAAAAGGATCCATTTAGTAAAGAAGAAGAAAAAAAAGTGCTTCATTTATATACTAAGTTTGGTGGATTATGGTCTAAAATGGTTGCGGAGTTGCCTGGAAGAACCGATAATGCCATCAAGAACTTTTGGAATTCAAGAGATAGAAAACGTAAAAGGTATGGCCTACAAGTTGATGATGACTTAAATGGTGATGGAGAAAGTAGTTTGAGCGGTTCGAGTAGCCAACAAGTTGATAATTTTCAAGAAGACAAAAATTGGGAAGGCTCGGATGTTAGTCGCATGCGTTCCTTTGAGATAAATTTGGTTGATGAAAAAGGGAAGAAACCAATTTCTTTGGAGAACGGTATTAAAGCAAGCCATGGTGACTTAATGGATACAGATATTTGGTTTGATTATGATTCATTTGAGAAAGACAACTACAACAAATATGGAAAAGGGGAGGAGCCAATTTCTTTGGAGAACAATGTTGAAGCAAACCATGATGACTTAATGGATCCGTATCTTTTGATTGACTTCAGTTGTTAA 708 0.3503 MSSSFDTNKKEKWSKEEDEILKAYVREYGEENWNALSKNAGFKRDGKSCRFRWYNHLHPKVKKDPFSKEEEKKVLHLYTKFGGLWSKMVAELPGRTDNAIKNFWNSRDRKRKRYGLQVDDDLNGDGESSLSGSSSQQVDNFQEDKNWEGSDVSRMRSFEINLVDEKGKKPISLENGIKASHGDLMDTDIWFDYDSFEKDNYNKYGKGEEPISLENNVEANHDDLMDPYLLIDFSC* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0754 235 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 8 116 - -
Mal8g0754 235 Gene3D - 10 62 - -
Mal8g0754 235 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 112 IPR017930 -
Mal8g0754 235 CDD SANT 12 57 IPR001005 -
Mal8g0754 235 Pfam Myb-like DNA-binding domain 13 74 - -
Mal8g0754 235 PANTHER MYB DNA-BINDING DOMAIN PROTEIN 8 116 - -
Mal8g0754 235 MobiDBLite consensus disorder prediction 124 143 - -
Mal8g0754 235 MobiDBLite consensus disorder prediction 115 146 - -
Mal8g0754 235 Gene3D - 65 111 - -
Mal8g0754 235 ProSiteProfiles Myb-like domain profile. 9 57 IPR001005 -
Mal8g0754 235 SMART sant 9 59 IPR001005 -
Mal8g0754 235 SMART sant 62 110 IPR001005 -
Mal8g0754 235 ProSiteProfiles Myb-like domain profile. 58 108 IPR001005 -
Mal8g0754 235 CDD SANT 65 105 IPR001005 -
Mal8g0754 235 SUPERFAMILY Homeodomain-like 9 104 IPR009057 -
Mal8g0754 235 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0754 Mal-Chr8 11495794 11496949 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0754 9 118 MYB Transcription Factor Family AT2G32460 53.636 1.45e-39 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal8g0754 Myb_DNA-bind_6 1.3e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0754 K09422 - mtr:MTR_5g088610 172.94