Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0753 ATGTCTTCATCTTCTGATACTAATAATAGGTTAAAAAAAGGAAAATGGTCAAAAGAGGATGATGAAATATTAAAAGCATACGTGAGAGAATATGGAGAAGAAAATTGGGATGCTCTGTCAAAAAATGCAAGGCTCAATAGAGATGGTAAAAGTTGTCGATTTAGATGGTATAATCACCTACATCCAAAAGTGAAAAAGGGTCCATTTAGTAAAGAAGAAGAAAAAAAAGTGCTTCAGTTATATACTAAGTTTGGTGGATTTAAATGGTCTAAAATGGCTGTGGAGTTGCCTGGAAGAACCGATAATGACATCAAGAACTTTTGGAATACAAGAAAAAGAAAACGTGAAAGGCGTGGCCTACAAGTTGATGATGAGTTAAATGGTGATGGACCACAAGTTGATGATGAGTTAAACGGTGATGGAGAAAGTAGTTTGAGCGGTTCCAACAAATTTGATATACCAGAAGTGAAATTTAGAAAATATTCAAAGAATTGGGAAGGCTTAGATGTTAGTCGCATGTGTTCCTCTGAGATAAATTTGGTTGATGAAAAAGGTAATAAACCAATTTCTTTGGAGAACGGTAATGAAGCAAACCATGGTGACTTAATGGATACAGATATTTGGTTTGACTATGATTCATTTGAGAAAGACAACTACAACAAATATGAAAAAGGGGAGGAGCCAATTTCTTTGGAGAACGATTTTGAAGCAAACCATGACGACTTAATGGATCCATATCTTTTGATTGACTTCAGTTGTTAA 762 0.3465 MSSSSDTNNRLKKGKWSKEDDEILKAYVREYGEENWDALSKNARLNRDGKSCRFRWYNHLHPKVKKGPFSKEEEKKVLQLYTKFGGFKWSKMAVELPGRTDNDIKNFWNTRKRKRERRGLQVDDELNGDGPQVDDELNGDGESSLSGSNKFDIPEVKFRKYSKNWEGLDVSRMCSSEINLVDEKGNKPISLENGNEANHGDLMDTDIWFDYDSFEKDNYNKYEKGEEPISLENDFEANHDDLMDPYLLIDFSC* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0753 253 SUPERFAMILY Homeodomain-like 10 108 IPR009057 -
Mal8g0753 253 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 116 IPR017930 -
Mal8g0753 253 Pfam Myb-like DNA-binding domain 16 77 - -
Mal8g0753 253 Gene3D - 68 128 - -
Mal8g0753 253 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Mal8g0753 253 CDD SANT 15 60 IPR001005 -
Mal8g0753 253 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 1 164 - -
Mal8g0753 253 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 64 IPR017930 -
Mal8g0753 253 PANTHER MYB DNA-BINDING DOMAIN PROTEIN 1 164 - -
Mal8g0753 253 Gene3D - 5 65 - -
Mal8g0753 253 ProSiteProfiles Myb-like domain profile. 61 112 IPR001005 -
Mal8g0753 253 MobiDBLite consensus disorder prediction 119 148 - -
Mal8g0753 253 CDD SANT 68 112 IPR001005 -
Mal8g0753 253 SMART sant 65 114 IPR001005 -
Mal8g0753 253 SMART sant 12 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0753 Mal-Chr8 11483895 11485081 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0753 11 143 MYB Transcription Factor Family AT2G32460 52.239 2.38e-42 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal8g0753 Myb_DNA-bind_6 3.9e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0753 K09422 - mtr:MTR_5g088640 212.616