Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0752 ATGTCTTCATCTTCTGATACTAATAATAGGTTAAAAAAAGGAAAATGGTCAAAAGAGGATGATGAAATATTAAAAGCATTCGTGAGAGAATATGGAGAAGAAAATTGGGATGCTCTGTCAAAAAAAGCAGGGCTCAATAGAGATGGTAAGAGTTGTCGATTTAGATGGTATAATCACCTACACCCAAAAGTGAAAAAGGGTCCATTTAATAAAGAAGAAGAAGAAAAAGTGCTTCAATTATATACTAAGTTCGGTGGATTATGGTCTAAAATGGTTGCGGAGATGCCTGGAAGAACCGATAATAACATCAAGAACTTTTGGAATTCAAGAGATAGAAAACGTAAAAGGCATGGTCTACAAGTTGATGATGAGTTAAATGGTGATGGACCACAAGTTGATGAAGAGTTAAACAGTGATGGAGAAAGTAGTTTGGGTGGTTCCAGTAGCCAACAAGTTGATAATTTTCAAGAAGACAAATTTGATATACCAGAAGTGAAATTTAGAAAATGTTCAAAGAATTGGAAAGACTTAGATGTTAGTCGCATGTGTTCCTCTGAGATAAATTTGGTTGATGAAAAAGGGAAGAAACCAATTTCTTTGGAGAACGGTAATGAAGAAAACCATGATGACTTAATGGATACAGATATTTGGTTTGACTATGATTCATTTGAGAAAGACAACTACAACAAATATGGAAAAGGGGAGGAGCCAATTTCTTTGGAGAACGATGTTGAAGCAAACCATGACGACTTAATGGATCCGTATCTTTTGATTGACTTCAGTTGTTAA 789 0.3485 MSSSSDTNNRLKKGKWSKEDDEILKAFVREYGEENWDALSKKAGLNRDGKSCRFRWYNHLHPKVKKGPFNKEEEEKVLQLYTKFGGLWSKMVAEMPGRTDNNIKNFWNSRDRKRKRHGLQVDDELNGDGPQVDEELNSDGESSLGGSSSQQVDNFQEDKFDIPEVKFRKCSKNWKDLDVSRMCSSEINLVDEKGKKPISLENGNEENHDDLMDTDIWFDYDSFEKDNYNKYGKGEEPISLENDVEANHDDLMDPYLLIDFSC* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0752 262 CDD SANT 68 108 IPR001005 -
Mal8g0752 262 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Mal8g0752 262 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 64 IPR017930 -
Mal8g0752 262 CDD SANT 15 60 IPR001005 -
Mal8g0752 262 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 1 193 - -
Mal8g0752 262 MobiDBLite consensus disorder prediction 136 153 - -
Mal8g0752 262 Pfam Myb-like DNA-binding domain 16 76 - -
Mal8g0752 262 SMART sant 12 62 IPR001005 -
Mal8g0752 262 SMART sant 65 113 IPR001005 -
Mal8g0752 262 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 115 IPR017930 -
Mal8g0752 262 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Mal8g0752 262 Gene3D - 68 131 - -
Mal8g0752 262 MobiDBLite consensus disorder prediction 114 153 - -
Mal8g0752 262 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Mal8g0752 262 PANTHER MYB DNA-BINDING DOMAIN PROTEIN 1 193 - -
Mal8g0752 262 Gene3D - 5 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0752 Mal-Chr8 11477773 11479066 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0752 11 121 MYB Transcription Factor Family AT4G26930 53.153 8.75e-41 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal8g0752 Myb_DNA-bind_6 6.6e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0752 K09422 - mtr:MTR_5g088640 193.356