Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0735 ATGTCAAGTGGAGCAACACACTGGTGTTATGAATGCAGTCGACCAATTGTGCTTGAAGGGAGAGACATCGTTTGCCCTTACTGTGATGAGGGATTTGTACAAGAAATTAATGAGATGCGAGGCACTGCACCTCAAAATACCTTTCCGTCACGCTCGGGAGAGTTTAATCAAATGCCTGACTTATTTGATGCTATACATGCTTTCGTGGGGCACAGAGGTTCTGACAATAGGTTCGGGCTTATGGATGCTGTTGATAATTTCATGAGACATAGAATGGCTGGAATGCACCCAAACTTTGATGTTAGAGGGAGGTCTAGTTCTGTTCCGGTTCCTGAACAGGGTTGGGGTGTTTATAGTTCTGGTCCTTTTTTAGTATTTCACGGTCAAGTTCCTGGATTAACCTTGCCTAATGGAAGCCCAAGGGGTGGTCCTAGGCGTGGCGATTTTGGTGACTATTTTATGGGTTCTGGACTGGAAGAACTTATTGAACAACTAACCATGAATGATCGGCGTGGTCCACCCCCAGCTGCACGATCTTCAATTGATGCAATGCCTACTATTAGGATCACACAGGCACATCTTCGCTCAGATTCACATTGTCCAGTCTGTAAAGAAAAATTTGAACTTGGTTCTGAAGCCAGAGAGATGCCATGTGACCATATTTACCATTCTGAATGTATTGTTCCTTGGTTAGTTCAACATAACTCGTGTCCTGTTTGCCGTGTTGAGCTGCCACCACAAGGACAGATGAGTTCTCGTGGTAGTAGTCGAAGCAACAGCGGTGGAAATGGTAGCTCAAGGGGCAGGGAGAGTGACCGTCCAAACACTGGAAGGAGAAATCCATTTTCGTTTCTGTGGCCATTCCGTTCTTCTAGTTCAAACAATAATCAATATTCTGAGACTGGAGGAAGCAGCTCTTCAACCAATGCTGACCAGAATAATGGAACAAGTTATAATGGATGGCATTATGATAACTAA 978 0.4448 MSSGATHWCYECSRPIVLEGRDIVCPYCDEGFVQEINEMRGTAPQNTFPSRSGEFNQMPDLFDAIHAFVGHRGSDNRFGLMDAVDNFMRHRMAGMHPNFDVRGRSSSVPVPEQGWGVYSSGPFLVFHGQVPGLTLPNGSPRGGPRRGDFGDYFMGSGLEELIEQLTMNDRRGPPPAARSSIDAMPTIRITQAHLRSDSHCPVCKEKFELGSEAREMPCDHIYHSECIVPWLVQHNSCPVCRVELPPQGQMSSRGSSRSNSGGNGSSRGRESDRPNTGRRNPFSFLWPFRSSSSNNNQYSETGGSSSSTNADQNNGTSYNGWHYDN* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0735 325 Pfam Ring finger domain 199 241 IPR001841 -
Mal8g0735 325 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 163 247 IPR013083 -
Mal8g0735 325 PANTHER OS03G0351800 PROTEIN 1 308 - -
Mal8g0735 325 SMART ring_2 200 240 IPR001841 -
Mal8g0735 325 SUPERFAMILY RING/U-box 180 247 - -
Mal8g0735 325 Pfam zinc-ribbon 6 36 IPR039525 GO:0061630
Mal8g0735 325 MobiDBLite consensus disorder prediction 246 325 - -
Mal8g0735 325 CDD RING-H2_RNF126_like 200 241 - -
Mal8g0735 325 ProSiteProfiles Zinc finger RING-type profile. 200 241 IPR001841 -
Mal8g0735 325 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 1 308 - -
Mal8g0735 325 MobiDBLite consensus disorder prediction 248 270 - -
Mal8g0735 325 MobiDBLite consensus disorder prediction 285 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0735 Mal-Chr8 11324654 11325631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0735 144 249 C3H Transcription Factor Family AT5G01980 44.444 4.99e-27 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0735 K11982 - gmx:100813674 540.421