Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0711 ATGGCTTTCACACTAGAGAGGTGTGAAGATAACATGGTGTTCACTATGGAGTCTCAGAAGTCAGTGCCTGCTCCTTTCTTGACAAAGACATACCAACTTGTTGATGATCCACTCACTGACCACATTGTATCTTGGAGTGATGATGAAACTACATTTGTTGTTTGGAGGCCTCCTGAGTTTGCTAGAGATCTTCTTCCCAATTTTTTCAAGCATAACAACTTCTCAAGCTTTGTTAGGCAACTAAATACCTATGGCTTCAAGAAGGTTGTTGCTGATAGGTGGGAGTTTGCAAATGAATACTTCAAAAAAGGAGCAAAACATCTATTATGTGAAATCCACAGGAGAAAAACCCCTCAACACTATCAACAACAATACTATGAACAATCACCACAAATTTTTCAACCAGATGAAAGTATTTGTTGGATTGATTCTCCGTTATCATCTCCTAAATCAGGCACTGATATCTTAACAGCACTCTCTGAGGACAATCAAAGACTAAGGAGAAAGAATTTCATGCTGTTATCAGAACTCACTCACATGAAGAATCTTTACAATGATATTATATATTTCATTCAAAACCATGTGAGTCCTGCTACACCCTTTGAACAAAGAAGCAACAATAGTGCTATTTTGAAGCTTGTTGAATTAGATTCATCATCACCTCAATTACCAAATGATAAGGATTGTAATAGCTCTTATGTGAAGCTCTTTGGTGTTCCTCTTTGTGGAAAAAAGAGAGTGCATCCTAGTAATCTTGATTAA 762 0.3701 MAFTLERCEDNMVFTMESQKSVPAPFLTKTYQLVDDPLTDHIVSWSDDETTFVVWRPPEFARDLLPNFFKHNNFSSFVRQLNTYGFKKVVADRWEFANEYFKKGAKHLLCEIHRRKTPQHYQQQYYEQSPQIFQPDESICWIDSPLSSPKSGTDILTALSEDNQRLRRKNFMLLSELTHMKNLYNDIIYFIQNHVSPATPFEQRSNNSAILKLVELDSSSPQLPNDKDCNSSYVKLFGVPLCGKKRVHPSNLD* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0711 253 Pfam HSF-type DNA-binding 26 115 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal8g0711 253 SUPERFAMILY "Winged helix" DNA-binding domain 23 115 IPR036390 -
Mal8g0711 253 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 10 249 IPR027725 -
Mal8g0711 253 PANTHER HEAT STRESS TRANSCRIPTION FACTOR B-4B 10 249 - -
Mal8g0711 253 ProSitePatterns HSF-type DNA-binding domain signature. 65 89 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal8g0711 253 Gene3D - 18 117 IPR036388 -
Mal8g0711 253 PRINTS Heat shock factor (HSF) domain signature 64 76 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal8g0711 253 PRINTS Heat shock factor (HSF) domain signature 77 89 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal8g0711 253 PRINTS Heat shock factor (HSF) domain signature 26 49 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal8g0711 253 SMART hsfneu3 22 115 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0711 Mal-Chr8 10925930 10927671 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0711 20 211 HSF AT1G46264 62.727 1.23e-89 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mal8g0711 HSF_DNA-bind 3.3e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0711 K09419 - gmx:100527682 418.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g0711 8 10925930 10927671 Mal8g0711 8 10925930 10927671 ECH