Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0695 ATGGATCCAAGTTACAAGTCTGTCGAAGAAGATGAAATGGAGGATAAAAGACAAGAAGCTGCCACAGCACCATCATCTGGCGGATTAGCAGGTCCAGCTTTGAAAACTAATGAAATTGAAAAGATGTGGCATTATCAGGATCCATCTGGAAAAGTTCAGGGACCATTTTCCATGGTGCAACTTCACACATGGAATAATACTGGATTAAGGATTTGGAAAGCCAGCGAGAGACAAGACGAATCTATACTCTTAACAGATTTCTTAGCAGGAAATTTTTCAAAGGAACCATCCATGGTGAATAATACTGGTATGACTGCAGATACTACTCTAGTGCATCTTCAAGCAACAACTGCAAATATGCAAAACCATTCATCTGTTCAGAACTCTGCCTCATTTAGCACCACTGGAAATCCAACTGGGAGTTTACCCACACATGGTTTTCCAGGCATGACTGCCCCAACATTTAGAAACTTCAATTTGTTGGGGCATGACCATGCCTTTCCATCATTCCCACCACCACCCATGCAATGGGGCATGACCATGCCTGGAAATCAGATTATTAGCTTGGGTGCAACTTCAAGATGGGCTAACAATCTGAATGTCAACTGGGCGCCTGCACAAGTGCCAGCATCTGGAAATGTCATTCCAGGATGGGCAGCTCCTACCCAGGGGCTACCTCCAGTAAATGCAAATAGATGGGTAGCACCTGGTCAAGGGCCGGCACCTGGAAATGCCAATCCTGCAAATAGATGGGCTGCATCTGCTGGGAACCATAGTGGAGACAGGTTCCACAACCAAGAGGATCGTGGTAACCGTGCTGGAGATTCTGGTCGTGGAGGTAAATCTTGGAACAGGCAGTCATCATTTAGAAGCGGAGGCAGAGAGGGTTCTTCTAGGCCTCCCGGTGGGGGACAAAGAGGAATCTGCAGGTATTATGAGAGTGGAAATTGCAGGAAAGGAGCTTCCTGTGATTATCAACACAAGTGA 987 0.462 MDPSYKSVEEDEMEDKRQEAATAPSSGGLAGPALKTNEIEKMWHYQDPSGKVQGPFSMVQLHTWNNTGLRIWKASERQDESILLTDFLAGNFSKEPSMVNNTGMTADTTLVHLQATTANMQNHSSVQNSASFSTTGNPTGSLPTHGFPGMTAPTFRNFNLLGHDHAFPSFPPPPMQWGMTMPGNQIISLGATSRWANNLNVNWAPAQVPASGNVIPGWAAPTQGLPPVNANRWVAPGQGPAPGNANPANRWAASAGNHSGDRFHNQEDRGNRAGDSGRGGKSWNRQSSFRSGGREGSSRPPGGGQRGICRYYESGNCRKGASCDYQHK* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0695 328 SMART gyf_5 41 91 IPR003169 GO:0005515
Mal8g0695 328 ProSiteProfiles GYF domain profile. 40 89 IPR003169 GO:0005515
Mal8g0695 328 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 19 6 135 - -
Mal8g0695 328 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 19 175 327 - -
Mal8g0695 328 MobiDBLite consensus disorder prediction 229 328 - -
Mal8g0695 328 MobiDBLite consensus disorder prediction 280 294 - -
Mal8g0695 328 MobiDBLite consensus disorder prediction 1 19 - -
Mal8g0695 328 Gene3D - 41 95 IPR035445 -
Mal8g0695 328 PANTHER UNCHARACTERIZED 6 135 - -
Mal8g0695 328 MobiDBLite consensus disorder prediction 1 32 - -
Mal8g0695 328 SUPERFAMILY CCCH zinc finger 306 328 IPR036855 GO:0046872
Mal8g0695 328 ProSiteProfiles Zinc finger C3H1-type profile. 303 328 IPR000571 GO:0046872
Mal8g0695 328 Pfam GYF domain 43 68 IPR003169 GO:0005515
Mal8g0695 328 PANTHER UNCHARACTERIZED 175 327 - -
Mal8g0695 328 SUPERFAMILY GYF domain 33 88 IPR035445 -
Mal8g0695 328 MobiDBLite consensus disorder prediction 261 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0695 Mal-Chr8 10645555 10646666 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mal8g0695 GYF 3.1e-07 CL0673
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0695 - - mtr:MTR_3g117490 245.743