Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0677 ATGGGTATGTTTGTTGTAGCACCATCTTCTTTTCACCACCACAACAACCACCATGAAGCTCTTATGTCTGACCCTCACTCTCTTAATAACCCCGCCACCGCTCTCGGTGTCGGGGTTATCCCTTTACTCACATCTTCTCCATGTCTTGAAAATGAAAACATGTTGAACAACAGAAGAAACCAACAAGGTATTCAATTTTGGCATGAACAACATCATCAACAACAGCAACAACAACAACAACAAACTACACATTCACACTATTTGAAAAAACAAGGTTTTCTTGATCATCATAATACAAGTCCAACAAATTTGATTCACGGTGGTTGTGGTGGAGGAGGAGGATTAACTGGTTCTGGAACAAGTAGTGGTGGAGGAACAACAACGTGTCAAGATTGTGGAAACCAAGCAAAGAAAGATTGTAGTAATAGAAGGTGTAGAACTTGTTGTAAAAGTAGAGGTTTTGATTGCCCTACTCATGTTAAGAGTACTTGGGTACCTGCTGCTAGAAGAAGGGAACGTCTTGCTACTACGGCTACAACGACGGTGGTTGCTGGTGGTGGTTCTAGTGGTTCAACTTCTGGTGCTAAGAAACCTAGACTTATTGCTTCACAAACTACTTCTCATACTTCTACTTCTAATACTACCCCTCCTAGAAGCTTTGATACTACCTCTAGCCATCAAGATGCAGGTTTCAAAGAGTCAATGCCAGGTCAAGTACGTGCACCAGCAGTATTCAAGTGTGTTAGAGTGACATCAGTGGATGATGGAAAAGATGAGTATGCATATCAAGCTGTAGTGAAGATTGGTGGCCATGTTTTCAAAGGTTTTCTTTATGATCATGGTGTTGAGAATAGGGAAGTTTATCCTAACCTTTCTGAGCTTCATTTAGGTGGTGGAAATGGAAATGTTGGAGGTGCAAATAGAAATGGTGTTTCATCTTCATCACCAATGTTAGATCCTTCTCATGATGTTTATGCAGCAGCTTCAAGTGGTGGTGGAGGTTTACTTGGAGGTTCAGCTTATGCTGCAGGTTTTTATCACATGATTTTGGCTAATGGATAA 1062 0.4105 MGMFVVAPSSFHHHNNHHEALMSDPHSLNNPATALGVGVIPLLTSSPCLENENMLNNRRNQQGIQFWHEQHHQQQQQQQQQTTHSHYLKKQGFLDHHNTSPTNLIHGGCGGGGGLTGSGTSSGGGTTTCQDCGNQAKKDCSNRRCRTCCKSRGFDCPTHVKSTWVPAARRRERLATTATTTVVAGGGSSGSTSGAKKPRLIASQTTSHTSTSNTTPPRSFDTTSSHQDAGFKESMPGQVRAPAVFKCVRVTSVDDGKDEYAYQAVVKIGGHVFKGFLYDHGVENREVYPNLSELHLGGGNGNVGGANRNGVSSSSPMLDPSHDVYAAASSGGGGLLGGSAYAAGFYHMILANG* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0677 353 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 341 IPR007818 GO:0003700|GO:0006355
Mal8g0677 353 MobiDBLite consensus disorder prediction 175 231 - -
Mal8g0677 353 Pfam Domain of unknown function (DUF702) 126 283 - -
Mal8g0677 353 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 128 170 IPR006510 -
Mal8g0677 353 MobiDBLite consensus disorder prediction 175 235 - -
Mal8g0677 353 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 341 - -
Mal8g0677 353 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 235 282 IPR006511 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0677 Mal-Chr8 10366458 10369447 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0677 3 325 C2H2 Transcription Factor Family AT5G12330 49.851 1.93e-82 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Mal8g0677 DUF702 2.1e-61 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0677 - - gmx:100776306 377.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g0677 8 10366458 10369447 Mal8g0677 8 10366458 10369447 ECH