Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0649 ATGAGAGAAGATCATCATTCCAATCATCATTACACGATGAAAGATCATGATCATTCGCATCATCATCAACATCATCATCTTCCATGTTCTGGAAAGAAGCGCAAGGAATATGCGGAATCATCAAGTAACAGCAACATTGCTCGTACTTGCACTGAATGCGGTAAGAAATTCTGGTCATGGAAGGCTCTTTTTGGTCACATGCGTTGTCATCCTGAGCGTCAATGGAGAGGAATCAATCCTCCTCCTAATTTCAGAAGACAACATCAACAACAACACTTTCAGAGTTCTCCTCCTCACTCTTTCATCAACAACATGACTCCAGAGGATCACGAAGTTGCCGCTTGTTTGATCTTACTTGCAAATTCATCAAAGAACAAGGCGTCGTCGTTGAAGTTTAAAGCAACGGTGGATGATTCATCAACGATGGTGGATCAAGATAACTGTAATAATAGTCAGTTCGTGTGTTCGTGTTGCAACAAGGTGTTTGGATCTCATCAGGCTCTTGGAGGACACAGGGCTAGTCACAAGAATGTCAAGGGCTGTTTCGCCAATACACCAACAATAACCGCTTCCACTACCAGCAGGTTGGTGATGTGGACACAACAAACCACCCCTCAAGGAGTTGGAGATCATGCTTTTCTTACTGCTGCTTCTGATAACGACGACCACCACCCAATGATGATCATGCCTCAGCCTCGTGGTGGTGGTGGTGGTGACGGTTATACTAATGCTGGTGGTGGTGGTGACGTGGAAGGTGAGATAAGCAGCAGCAGCATCGGAGTCGGAGGAGGAGGACACAAGTGTAGCATATGTTTGAGGGTATTTACCACTGGACAAGCACTCGGTGGTCATAAGAGGTGTCACTGGGAAAAAGGGGAAACCACCACTGCACCACCACCATCAACACCATTCGATTCTTCTTCTACTGCAACTGCAACTGCAACAACATCCAACAACAAGTCTATTGATTTGAATTTCCCTTTTCCACCTCTCCCTCCACCACCTCCTCCTGATGATGATGATCCTCATTCCTCCTCTTCTCCCCTCACTCTTGATTTGAGGTTGGGACTTTAA 1074 0.4581 MREDHHSNHHYTMKDHDHSHHHQHHHLPCSGKKRKEYAESSSNSNIARTCTECGKKFWSWKALFGHMRCHPERQWRGINPPPNFRRQHQQQHFQSSPPHSFINNMTPEDHEVAACLILLANSSKNKASSLKFKATVDDSSTMVDQDNCNNSQFVCSCCNKVFGSHQALGGHRASHKNVKGCFANTPTITASTTSRLVMWTQQTTPQGVGDHAFLTAASDNDDHHPMMIMPQPRGGGGGDGYTNAGGGGDVEGEISSSSIGVGGGGHKCSICLRVFTTGQALGGHKRCHWEKGETTTAPPPSTPFDSSSTATATATTSNNKSIDLNFPFPPLPPPPPPDDDDPHSSSSPLTLDLRLGL* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0649 357 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 14 357 - -
Mal8g0649 357 MobiDBLite consensus disorder prediction 1 35 - -
Mal8g0649 357 Pfam C2H2-type zinc finger 49 72 - -
Mal8g0649 357 Pfam C2H2-type zinc finger 266 290 - -
Mal8g0649 357 Pfam C2H2-type zinc finger 153 176 - -
Mal8g0649 357 ProSiteProfiles Zinc finger C2H2 type domain profile. 266 293 IPR013087 -
Mal8g0649 357 SMART c2h2final6 48 70 IPR013087 -
Mal8g0649 357 SMART c2h2final6 153 175 IPR013087 -
Mal8g0649 357 SMART c2h2final6 266 288 IPR013087 -
Mal8g0649 357 ProSitePatterns Zinc finger C2H2 type domain signature. 268 288 IPR013087 -
Mal8g0649 357 MobiDBLite consensus disorder prediction 15 31 - -
Mal8g0649 357 ProSiteProfiles Zinc finger C2H2 type domain profile. 48 75 IPR013087 -
Mal8g0649 357 MobiDBLite consensus disorder prediction 326 342 - -
Mal8g0649 357 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 14 357 - -
Mal8g0649 357 MobiDBLite consensus disorder prediction 295 324 - -
Mal8g0649 357 MobiDBLite consensus disorder prediction 290 357 - -
Mal8g0649 357 ProSitePatterns Zinc finger C2H2 type domain signature. 155 175 IPR013087 -
Mal8g0649 357 SUPERFAMILY beta-beta-alpha zinc fingers 49 175 IPR036236 -
Mal8g0649 357 ProSitePatterns Zinc finger C2H2 type domain signature. 50 70 IPR013087 -
Mal8g0649 357 ProSiteProfiles Zinc finger C2H2 type domain profile. 153 180 IPR013087 -
Mal8g0649 357 SUPERFAMILY beta-beta-alpha zinc fingers 264 291 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0649 Mal-Chr8 9781642 9782715 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0649 46 357 C2H2 Transcription Factor Family AT4G35280 40.317 9.80e-60 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal8g0649 zf-C2H2_6 2.3e-11 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0649 - - cam:101508937 266.159