Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0648 ATGGAATATGGTGGTGGGTTAGTGGCGGACGGTGGTGTTTATGGTACGATGGTCGGAGGAGGAGGAGGAGATCAAGCTGCAGATATAATTGAGGAGCTGTTGGGAGAAGGTTGTTGGATTGAAGCAAGTGAGAACAGTTTGATGGGCATGCAGCAAACAACGCCACAGCCACACTACATGTCCAATAATAATAATAATAATATTCCTATGGGAATGGGAGAGGGAGGTCCCTTCAATAATCATCATCAAATGGAATGCACTGCAGCAGCAGCAGCAGCAGCAAATCATGATGATCAGGAAAATGGTTTTGTTGTTGGGAAGAGATGGTGGATTGGACCTAGGGCAAATCCAGGTCCAACAACCTCTGTGAAAGAAAGATTAGTTGTTGCTGTTGGTTACCTAAAAGAGTACACAAAGAACTCTTCCAACAACGTCCTTATTCAGATATGGGTACCTATGAGGAGGAGATCACCTCTAATTCACACTCACAATCACTACCTGCAGCAGGAGTCATCATCCGCACCTGTTTCTGTGAATCCAAACATGAACGTTCATGTTCGTTTCTTTAGAAGCCACGATTATCCGCGGCATCAGCAACAACAGCAGCAGCAGTATGGATCTCTTCTAGCCCTTCCAGTCTTTGAAAGAGGAAGCGGGACATGCCTTGGTGTCATCGAGTTTGTTATCTCCAATCAAAACCTCATCAATTACCGTCCACAACTTGATCATCTCTCCAATGCTCTTGAGGCTGTTGATTTTAGAAGTAGTCACAACATGAATATTCCACAAGCCGTAAAGGTATTTGAGGAGTTGTATGAAGCAGCGGTGAACGAGATCATGGAAGTGTTGGCGTCGGTGTGTAAGACGCACAATTTACCATTAGCACTAACATGGGCTCCTTGCCTACAGCAACAAGGAGGAGGAATGTTTAGATCAGGAGGAAAGGGTGCAGCAGCAGGAGGAGGAGGAGGTTGTGGTGTTCCAACGGATCAGATGAGTATGATGAGTTGTTGCATATCAACCGTTGATTCAGCTTGTTATGTTGGTGACATGGATGTATTGGGATTCCAAGAAGCGTGCAGTGAGTATCACCTTTTTAACGGACAAGGAATAGTAGGAACAGCCTTCACCACAACCAAACCTTGTTTTGCAATTGACATTACCGCTTTCAGCAAATCTGAATATCCACTCGCTCACCATGCTAACATGTTTGGCTTACACGCTGCGGTTGCTATTCCATTGAGGAGTGTCTACACCGGATCTGCTGCTGATTTTGTTTTGGAGTTTTTCCTTCCTAAAGATTGCCGTGACACTGAGCAACAGAAACAAATGCTCAATTCATTATCCCTTGTTGTTCAGCAAGCTTGTAGGAGCTTGCATTTGCATGTCGTCATGGACGATAATAATAATAATGATATTGACAGTAATGCTCATGACCATGATCATGATCAATTCACCTTCCCAACAACAACAACAAATAGTTACATGCCTTCTTCTACTTCTGAACCACTATCATCACAAGTTGATGCAGTTTCAGGTTGTTCAACCAAAGACACGAATTCATCATCCTGTTCTTGGATTGCACATATGATGGAGGCACAAAACAAGGGGAAAGGTGTGTCTGTGTCATTGGAATACCTGCAAGAGCCTAAAGAGGAATTCAAAGTCACAACCTGCAACTGGGACAGGGAAAGGGAGGACAACGTCTTTACTGATTTTGGCCAAGTACTGCAGCAACAGCATGATCAGAGCAGTAATTCAAGAGCAAGTGTAGTAAGTTTAGAAGCTGGTGAAGAATCCCCCGGTGCTTGTGGTGGTGGTCGTCGGTCATCTTCTTCTTCGAGTGGGAGAAAGCCAGGCGACAAGCGAAGAACAAAGGCGGAGAAGACTATAAGCTTGCCTGTTCTCAGACAATACTTTGCCGGAAGCCTGAAAGACGCCGCAAAAAGCATCGGTGTGTGTCCTACAACTCTGAAAAGGATATGCAGACAGCATGGGATTACAAGATGGCCTTCAAGAAAAATAAAGAAAGTGGGCCACTCTTTGAAGAAGCTTCAACTTGTGATTGATTCTGTTCAAGGTGCAGAGGGTGCCATACAGATTGGCTCTTTCTATGCCAGCTTTCCAGAGTTGAGCACTGCAACTGCTAATGGTGGTGGTGATGGTAATGATCACAACAACAATAACAGCAGCAGCTTCTATAACAGCCATGGAGATGGAATAGTTACTAGTTTGAAATCACCACCCTCTGCTTGCAGTCAGACCCACCATGCAGGAAACAAATTACCTATGATTAATGTAGATCATCATCATCATCATCATCGTGTTGTGATGACAGAAAACCCTACAACAGCTCCTTTAGCAGCTGATCACGCATTGATGCATGCATCCAATATTAATATCCAGGACTACCATCAGCTGCAGCAGGAGGATCATGATACTAAGCAATTACTGCTACATTTCAACAACAACAACCAAATCCTACCTCCAAGACCTGCAGCCTGGAACAACAACAACAACAACAATTCTTCATCATCAACACTATTAGAAAGGGGTGCTTTCAGAGTGAAGGCAACTTTCGCGGATGAAAAAATCAGGTTTAGCTTGCAAGCAATGTGGGGTTTTAGAGATCTGCAGCTTGAGATTGCAAGGCGTTTCAACCTAACCGATATGAACAACTTGGTTCTAAAGTATTTGGATGATGAAGGAGAATGGGTTGTATTATCATGTGATGCTGATCTTGAAGAATGTAAAGACTTGCACACATCATCACATACACGTACCATTAGACTCTCCCTTTTTCAAGCTTCACCTCTCAATCTTCCAAACACTTTCCGCAACAGCAGCAGCAGTCCATCCTCTTAG 2865 0.4394 MEYGGGLVADGGVYGTMVGGGGGDQAADIIEELLGEGCWIEASENSLMGMQQTTPQPHYMSNNNNNNIPMGMGEGGPFNNHHQMECTAAAAAAANHDDQENGFVVGKRWWIGPRANPGPTTSVKERLVVAVGYLKEYTKNSSNNVLIQIWVPMRRRSPLIHTHNHYLQQESSSAPVSVNPNMNVHVRFFRSHDYPRHQQQQQQQYGSLLALPVFERGSGTCLGVIEFVISNQNLINYRPQLDHLSNALEAVDFRSSHNMNIPQAVKVFEELYEAAVNEIMEVLASVCKTHNLPLALTWAPCLQQQGGGMFRSGGKGAAAGGGGGCGVPTDQMSMMSCCISTVDSACYVGDMDVLGFQEACSEYHLFNGQGIVGTAFTTTKPCFAIDITAFSKSEYPLAHHANMFGLHAAVAIPLRSVYTGSAADFVLEFFLPKDCRDTEQQKQMLNSLSLVVQQACRSLHLHVVMDDNNNNDIDSNAHDHDHDQFTFPTTTTNSYMPSSTSEPLSSQVDAVSGCSTKDTNSSSCSWIAHMMEAQNKGKGVSVSLEYLQEPKEEFKVTTCNWDREREDNVFTDFGQVLQQQHDQSSNSRASVVSLEAGEESPGACGGGRRSSSSSSGRKPGDKRRTKAEKTISLPVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGITRWPSRKIKKVGHSLKKLQLVIDSVQGAEGAIQIGSFYASFPELSTATANGGGDGNDHNNNNSSSFYNSHGDGIVTSLKSPPSACSQTHHAGNKLPMINVDHHHHHHRVVMTENPTTAPLAADHALMHASNINIQDYHQLQQEDHDTKQLLLHFNNNNQILPPRPAAWNNNNNNNSSSSTLLERGAFRVKATFADEKIRFSLQAMWGFRDLQLEIARRFNLTDMNNLVLKYLDDEGEWVVLSCDADLEECKDLHTSSHTRTIRLSLFQASPLNLPNTFRNSSSSPSS* 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0648 954 MobiDBLite consensus disorder prediction 578 628 - -
Mal8g0648 954 Gene3D - 852 938 - -
Mal8g0648 954 SUPERFAMILY CAD & PB1 domains 842 938 - -
Mal8g0648 954 MobiDBLite consensus disorder prediction 716 735 - -
Mal8g0648 954 MobiDBLite consensus disorder prediction 578 593 - -
Mal8g0648 954 ProSiteProfiles RWP-RK domain profile. 617 698 IPR003035 -
Mal8g0648 954 ProSiteProfiles PB1 domain profile. 853 936 IPR000270 GO:0005515
Mal8g0648 954 Pfam RWP-RK domain 631 678 IPR003035 -
Mal8g0648 954 PANTHER PROTEIN NLP2 31 943 - -
Mal8g0648 954 SMART PB1_new 853 936 IPR000270 GO:0005515
Mal8g0648 954 CDD PB1_NLP 854 935 IPR034891 -
Mal8g0648 954 Pfam PB1 domain 854 935 IPR000270 GO:0005515
Mal8g0648 954 PANTHER PROTEIN NLP8 31 943 IPR045012 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0648 Mal-Chr8 9731711 9734910 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0648 28 953 NLP Transcription Factor Family AT4G35270 38.677 0.0 617
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Mal8g0648 PB1 2.8e-14 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0648 - - mtr:MTR_5g099060 1560.43