Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0578 ATGTCTATGGAAAAAAATGGAGACCAGTCACGTGGTTTTACCTATGATGTTTTCCTAAGTTTTAGAGGAGAAGATGTGCGGCACAATTTTATCGGTTATCTTCGCGATGCATTGCTTCATCGGGGAATCAATGCTTTCTTTGATGATAAGAATCTGAAAATAGGGGAAGATATTTCACCTGCACTTTCAAAAGCCATTGAAGAATCTAAAATCTCAGTTATTGTTTTTTCTGAGGATTATGCATCTTCCAGGTGGTGTCTTGGCGAACTGGCAAACATCATGGAATGTACGAAGAGAAACAAAAAACAAATTGCTTTTCCAATCTTTTACCATGTTGATCCATCAGATGTAAGACATCAAAGAAATAGTTATGGAGAAGCTATGGTTGCTCATCAGAAAAGGTTTGGAGAAGACTCTGAAAATGTAAAGACATGGATAGCAGCATTGTCTGAAGCCGCGGACTTGAAAGGACATCATATCAATACCGGATTTGAAATTGATCATATAAAAGAGATTGTTGAAAAGGTCCATGCTAACATTACTCCTAAACCTTTGCTTTCTGGTGACGATCCAGTTGGACTTGAACATCATACAGAAAAGGTGAAGTCACTTCTAGACAATACTGATCATGCTGTATGCATGTTGGGCATATGTGGACTTGGTGGAATAGGGAAAACAGAACTTGCCAAATCATTGTATAACAAGATTGTGCATCAGTTTGAAGCTGCAAGTTTTCTTGCCAATGTTAGAGAGAAATCAAAAACTATCAGTGGCCTAGAAGATCTACAGAAGACACTTTTATCAGAGATGTTCGAGCAGCCAGAAACCGAGCTGGGAAGTACAAGTAAAGGAATCTATGAAATAAAACGCAAGCTTTGGAAGAAAAAGGTTCTTTTGGTTCTTGATGACGTTGATAACATAGAACAATTAAAAAAATTGGCAGGAGGAAGTGATTGGTTTGGTCGAGGCAGTAGGATCATTATAACTACAAGGGATAAAGGTTTGCTCATGGGTATTCATGCAATAGAAGTTCGAAAGATTTATGAAATGACTGAACTTAATTATCAACATTCTCTTGAGTTGTTTTGTCGGAATGCCTTTGGGAAGAGCCATCCAGAAACAGGCTATGAAGCTATGTCTTCTCGCGCGGTTGGTTATGCTAAGGGTCTTCCATTGGCTTTAAAAGTAATAGGTTCCAATTTGGCTACTAGAAAGAGTATAAGAGCTTGGGAACATGCATTGAAAGATTACGAGAGAACTCCACGTAAAGGTATTCAAGACGTGCTCAAAGTAAGCTATGAGGTGTTGGAGCCCTATGCCAAGATTGTTTTCCTAGATATAGCTTGCTTCTTCAAAGGGGAGAGAATAGAATATGTTGAAGAGATACTGGATGAATTCAGTGCAGTATCTAATATTGAAGAACTTGTTAATAAATCTCTATTAATTGTTAAACATGGCTGCTTGGATATGCATGATCTAATACAAGACATGGGTAGAGATATTGTCATGCAAGAGGCACTAGAATATCCAACCAAACGTAGTAGATTATGGTTTCATGAAGATGTCATTCGTGTATTATCAGATGAAAATTTTAGAAGTGATGTAACTAAAGGGATAATGCTTGATCCTCCCCAACCTTTAAGGCATGAAGATTGGAGTGATACTGTCTTTAAGAGGATGAGTTACCTGAGAATTCTCATTGTTCGAAGTACAACATTTTCATCGGAGCCTAAATATCTGCCAAATGAGTTACGGCTGCTTGACTGGGAAGGGTACCCTTCAAAGTCTTTGCCCCCAAATTTTCATCCAAAGAAAATCATCGTCTTCAATTTGCCTAAAAGCCGACTTACATTTGAAGAGCCATTTAAGGAATTTTCATATTTGACTGTCATGAATTTCTCCCAAAATGAATCAATCACTACAATGCCTGATGTGTCAAAAGTTAAAAATTTGAGAGAACTTAGACTTGATAATTGTAAGAACCTAATTATGGTTCATGAGTCCGTTGGATTTCTCGAACACCTTACCCACTTAAGCGCTTCAGGATGCCCCAAACTTCGAATTTTCCTGCAAAGAATGTTTTTACCATCCCTTGAATTCCTTGACCTTAATTTGTGTGTAGAACTTGAACACTTCCCAGATATAGTGGACAAGATGAATAAGCCATTGAAAATTCATATGATAAATACCGCAATTGAGGAGTTACCAGATTCCATTGGTAATCTTGTTGGGCTTGTTTCTATAGAGATGCCAAATAGTTGGAAGCTCAAATCCATACCATGTAGCTTATTCACACTACCAAATGCTGTCACCTTTAAATTTGGAGGATGTTCTCAACTTGGAGAATCCTTGAGAAGATTTCTACATGATATCCCTTTGGCAGCCAATGGTCGTTCAACATTAAAAGCATTGCATTTTGGAAATAGTGGTTTGTCAGATGATGATCTTAAGGCGATTCTCATCTCTTTTCTTGAATTACAAGAGTTGATTGTATCGGATAACAATTTCGTCTCTCTCCCTGTGTGCATTGAGGAGTCTGTTCACTTGACAAAGCTTGATGTCAGTGGTTGCAATATGCTTCGAAAAATTCTGGTATGCACCAACTTAAGAATTCTGAATGTTTACCGTTGTGTGATGCTTGAACACATATCAGAGTTGCCATGCACTATTCAAAAAGTAGATGCAAGACACTGCATCCGCTTGAATAGAGAGACGTCAGACATGTTATGGGATCAGGTGAAAAACGAGAGACGTGGAATAGAAATTGTGATGCCTCGAATGCAAACTGAGGTTCCAAATTGGTTTGACTCCAGCTGCAAAGGAGGGAATCCGCGTTTTTGGGTTCGTAAGAAGTTTCCCGTTGTTGCTTTAGCATTGGTGTACCAGGGGGTCACTGGGAGGACCACAAACTATCGGCGGCTACTTGTTGAGCTTCACTTGGATATAAATGGTCTACGTGTCCTTCGGAAAAGCTATTACAACTTCAGAATTGAACAAAATCATGTGTTAGTTTGTGATTTGCGACTCTTGTTCAGTGACGAGGAGTGGCTGGGCCTTGATGCATTACTTCTTGAGCATGAGTGGAATCAAGTGGAGGTTTCATATGATGCCCCATCCAGCGTGACACTAAGTGATTGGGGAGTATTTGTATACAAACGAGGAACCAACATGGAAGAATATGTCCAATTCATGTGTCCCGACCCAAAAAAATCATATGCTAGAACAAATGAAGTTCCTCCAACAGTTCCTCCAACAGATCATATGCTAGACCAAATGAAGTTGATAGATCAGTTAGCTCTAGATGAAATGTTACCTGGGATGTTGTCGGAATCTAAGGACTGGGAAGGCCGGTTTGCAAATAAAGAGAATTTTCAAGAGCTAATGGCAATAGTGAGTGGCCTAAGTAAGGAGGCTCAAGATGCATTAGAAGGTAAACCACTAGATGCTAAAAATTCCCCCTTGGCATGGATTCTTCGGACTATCAATGATGATGATAATGATGAGCCAACAAACTTTGACCACACAGATGAAATGAAACCCGCCATAGGTATAGGAGAAGCTTCAACCTATGGCCATCAGGGAAGTTCAGAGGCCCAAGACAGCGATGTTGAGCAGGATGAAATAATGACAGGGATATTCTTGAACGGAATGGGGGCAGGACTTCGTGAAGCACAGAGTAGCTTTCCTTCTCTAGATATAGACACAATCATGATTGCCGCCTTTAATAGAGGTGAATGGATTAAATTGTCATTCCCAGAGTCCGAGGTAGAAATGAAGATATACATGGAAGGAATTATCAATGGACTTCTGGAAGCAAAGCTGAGCTTTCCCACTCTGAAAGAATGCGAAATACTAAATACCATGTTAAGGAAGGAGGGCCATAACATGATGTTTCAAACAATAGATTGGACTGAAATTGTTGTTCCAAGCTCTGGTGATCCTTTGTTGCAAGCATTCATGATGATGAAGCAAGAAAGTTCTGAATTGGAGAGCGCCAAGAGTAAACTCTTCTGCAAGTTGCTTGCGGAACACAATGCTCTGCGCAAGAAATTTGAAGAGATTGAAAATGAAATTTCTACTCTTAATTATTCAAAGGAATCAACTATGCCGGACTCAACACCTTTGAGTAGCACCAAGATGCATACAAACATTGAGAAAGAAGGCTCCGAGAGTGTCACAAAGCATGGTAACCTGGCTGCTGTTTTGAAAGGAAGAGCTGAAGAATTGCAGAAGCTCTATGATGCTGGAATTGAAGAATTCCAAAACTCAAAAGAGATTCAAGATTTGATGACAGCTACATACTCAAATGGAATGAGGGATGGACTTCTTGAAGCACGGGCCATATTACTTGCTCTGGAAATTGACATACTAACTCATGTGTTTGAGGCGAATGCAAATGAAATTTCTGCTCTGGATAAAGATAGTCATCTTCCTTTTTCGGAAAATCAATATGATGATTTTCTGGAGAAGCTTAATGCTCAATTTGCTCAATATAATTCGAAGAAAGATCACAGCCTTGACGGTACTAATGATGATTCACACGCAAAGGAATCAAGCACAAAGGTTCGCGCAGACATTGGAAAAGAAAGCTGCAAAGATGTTACAAAGCATGAGATGCTGGCTGCTGTCTTGAAAGAAAGGGGAGAAGAATTGACAAGGCTCTATGATGCTGAAATTGAAGAATTCCAGAACTCCGAAGAGGTCCAAGATCAGATGATTGCCAAATACTTGAGTGGGCTGAGGGATGGAGTCATTGAAGCACAGGCCACCTTACTTTCTTTGAAGTTGACAGAAGTTGACATAACTCTGGACACTCCTTACCCGTATGGTTGCTTCTGGAGTATTTTGTACACTTGTTTTTGGAAGTGTTTCTCTTAG 4878 0.3965 MSMEKNGDQSRGFTYDVFLSFRGEDVRHNFIGYLRDALLHRGINAFFDDKNLKIGEDISPALSKAIEESKISVIVFSEDYASSRWCLGELANIMECTKRNKKQIAFPIFYHVDPSDVRHQRNSYGEAMVAHQKRFGEDSENVKTWIAALSEAADLKGHHINTGFEIDHIKEIVEKVHANITPKPLLSGDDPVGLEHHTEKVKSLLDNTDHAVCMLGICGLGGIGKTELAKSLYNKIVHQFEAASFLANVREKSKTISGLEDLQKTLLSEMFEQPETELGSTSKGIYEIKRKLWKKKVLLVLDDVDNIEQLKKLAGGSDWFGRGSRIIITTRDKGLLMGIHAIEVRKIYEMTELNYQHSLELFCRNAFGKSHPETGYEAMSSRAVGYAKGLPLALKVIGSNLATRKSIRAWEHALKDYERTPRKGIQDVLKVSYEVLEPYAKIVFLDIACFFKGERIEYVEEILDEFSAVSNIEELVNKSLLIVKHGCLDMHDLIQDMGRDIVMQEALEYPTKRSRLWFHEDVIRVLSDENFRSDVTKGIMLDPPQPLRHEDWSDTVFKRMSYLRILIVRSTTFSSEPKYLPNELRLLDWEGYPSKSLPPNFHPKKIIVFNLPKSRLTFEEPFKEFSYLTVMNFSQNESITTMPDVSKVKNLRELRLDNCKNLIMVHESVGFLEHLTHLSASGCPKLRIFLQRMFLPSLEFLDLNLCVELEHFPDIVDKMNKPLKIHMINTAIEELPDSIGNLVGLVSIEMPNSWKLKSIPCSLFTLPNAVTFKFGGCSQLGESLRRFLHDIPLAANGRSTLKALHFGNSGLSDDDLKAILISFLELQELIVSDNNFVSLPVCIEESVHLTKLDVSGCNMLRKILVCTNLRILNVYRCVMLEHISELPCTIQKVDARHCIRLNRETSDMLWDQVKNERRGIEIVMPRMQTEVPNWFDSSCKGGNPRFWVRKKFPVVALALVYQGVTGRTTNYRRLLVELHLDINGLRVLRKSYYNFRIEQNHVLVCDLRLLFSDEEWLGLDALLLEHEWNQVEVSYDAPSSVTLSDWGVFVYKRGTNMEEYVQFMCPDPKKSYARTNEVPPTVPPTDHMLDQMKLIDQLALDEMLPGMLSESKDWEGRFANKENFQELMAIVSGLSKEAQDALEGKPLDAKNSPLAWILRTINDDDNDEPTNFDHTDEMKPAIGIGEASTYGHQGSSEAQDSDVEQDEIMTGIFLNGMGAGLREAQSSFPSLDIDTIMIAAFNRGEWIKLSFPESEVEMKIYMEGIINGLLEAKLSFPTLKECEILNTMLRKEGHNMMFQTIDWTEIVVPSSGDPLLQAFMMMKQESSELESAKSKLFCKLLAEHNALRKKFEEIENEISTLNYSKESTMPDSTPLSSTKMHTNIEKEGSESVTKHGNLAAVLKGRAEELQKLYDAGIEEFQNSKEIQDLMTATYSNGMRDGLLEARAILLALEIDILTHVFEANANEISALDKDSHLPFSENQYDDFLEKLNAQFAQYNSKKDHSLDGTNDDSHAKESSTKVRADIGKESCKDVTKHEMLAAVLKERGEELTRLYDAEIEEFQNSEEVQDQMIAKYLSGLRDGVIEAQATLLSLKLTEVDITLDTPYPYGCFWSILYTCFWKCFS* 1626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0578 1625 SUPERFAMILY L domain-like 490 885 - -
Mal8g0578 1625 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 22 1043 - -
Mal8g0578 1625 Pfam TIR domain 15 176 IPR000157 GO:0007165
Mal8g0578 1625 MobiDBLite consensus disorder prediction 1502 1522 - -
Mal8g0578 1625 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 22 1043 IPR044974 GO:0006952
Mal8g0578 1625 Gene3D Ribonuclease Inhibitor 725 918 IPR032675 -
Mal8g0578 1625 Gene3D Ribonuclease Inhibitor 549 724 IPR032675 -
Mal8g0578 1625 Pfam NB-ARC domain 195 439 IPR002182 GO:0043531
Mal8g0578 1625 PRINTS Disease resistance protein signature 646 662 - -
Mal8g0578 1625 PRINTS Disease resistance protein signature 387 401 - -
Mal8g0578 1625 PRINTS Disease resistance protein signature 291 305 - -
Mal8g0578 1625 PRINTS Disease resistance protein signature 214 229 - -
Mal8g0578 1625 Gene3D - 183 344 IPR027417 -
Mal8g0578 1625 MobiDBLite consensus disorder prediction 1504 1522 - -
Mal8g0578 1625 ProSiteProfiles TIR domain profile. 13 184 IPR000157 GO:0007165
Mal8g0578 1625 Gene3D - 9 182 IPR035897 -
Mal8g0578 1625 SMART till_3 14 155 IPR000157 GO:0007165
Mal8g0578 1625 Gene3D - 352 437 IPR042197 -
Mal8g0578 1625 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 447 IPR027417 -
Mal8g0578 1625 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 157 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0578 Mal-Chr8 8691157 8720558 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0578 15 852 WRKY Transcription Factor Family AT4G12020 30.334 5.12e-80 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0578 - - mtr:MTR_5g090940 2473.74