Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0577 ATGGATGTGGCCAAGTTAGATAACTTTGATGACAAGAAAGAAGATGAAGTTGTGCTTCCTGGGTTTAGATTCCACCCAACAGATGAAGAGCTTGTTGGATTTTATCTACGGCGAAAAGTGGATAAGAAACCTCTTCGAATTGAACTCATCAAACAGATTGACATATACAAATATGATCCATGGGATCTACCAAAAGCTAGTACTGCGGGGGAAAAGGAATGCTATTTCTTTTGTTTAAGAGGAAGAAAATACAGGAATAGCATAAGGCCTAATAGAGTAACAGGATCTGGATTTTGGAAAGCTACAGGGATTGATAAACCTATATATTGTGTTAAAGAATCATCACATGAATGCATTGGCCTCAAGAAATCATTGGTTTACTACCGTGGAAGTGCAGGGAAAGGCACTAAAACTGATTGGATGATGCATGAATTTCGTCTCCCACCTAAAGGAAAAACTACCAATAATCATACCAATGATGTTCAAGAAGCTGAAGTGTGGACACTATGCAGAATATTCAAACGAATCCCATCATACAAAAATTACACTCCAAATGTGAAAAAAGATTCAGAAGTAGCATTCACAATTAACTCTTCAAGTTCCAAAACATGCAGCTTAGAATCTGATAACAGCAGACCATACTTGTCTTTCACAAACTCACAACATGTTGTTCAACAAAATCATGAAACCAAACCTTTCATTAATGGACATGTTGACCAAAGAATTAACCACTCATTTCTAAATCAATTAGGCAATGTAGCAGAGGCTCCAACAACAACCTTGTCTCACTCAAGTTTTTGGAATGATCAAAATGTTGCGGATGATGCATTTGCAAATGAGAATTGGGATGATCTTAGATCTGTTGTTCAATTTACCTTTGATCCATCAAAGGTTTACGATTGTAAAGATTTTTAA 915 0.3639 MDVAKLDNFDDKKEDEVVLPGFRFHPTDEELVGFYLRRKVDKKPLRIELIKQIDIYKYDPWDLPKASTAGEKECYFFCLRGRKYRNSIRPNRVTGSGFWKATGIDKPIYCVKESSHECIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPKGKTTNNHTNDVQEAEVWTLCRIFKRIPSYKNYTPNVKKDSEVAFTINSSSSKTCSLESDNSRPYLSFTNSQHVVQQNHETKPFINGHVDQRINHSFLNQLGNVAEAPTTTLSHSSFWNDQNVADDAFANENWDDLRSVVQFTFDPSKVYDCKDF* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0577 304 PANTHER - 6 302 - -
Mal8g0577 304 Pfam No apical meristem (NAM) protein 20 147 IPR003441 GO:0003677|GO:0006355
Mal8g0577 304 SUPERFAMILY NAC domain 16 174 IPR036093 GO:0003677|GO:0006355
Mal8g0577 304 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 302 - -
Mal8g0577 304 Gene3D NAC domain 27 178 IPR036093 GO:0003677|GO:0006355
Mal8g0577 304 ProSiteProfiles NAC domain profile. 18 175 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0577 Mal-Chr8 8678176 8681266 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0577 12 175 NAC Transcription Factor Family AT5G39820 60.000 1.29e-74 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal8g0577 NAM 3.7e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0577 - - gmx:100784323 459.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g0577 8 8678176 8681266 Mal8g0577 8 8678176 8681266 ECH