Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0547 ATGGCTAATGAGAATCAAGATCCTTTCTATCATGATGAACTCAATCACTCAAACTTTTCATTCTCACAAAACTTTCAAGGATTTGATCCTTCTTCTCATAGTACAAGTTTTAGTGACTACTTACATGGTTCCATGGACTACAACACCCTCTCAAAAGCCTTTGACTTGTCTTGTTCTTCATCTGAAGTGATTTCTTCCATTGATGACAACAATACTAAGAAATCTAGTGCAGGAGATTTATCATCACTAGTAGGGATTAGTGAGACACCAAATTCCTCAGAATCATCCTCATCTAATGAAGCTGTGGTAGAAGAAAACTCAACCAACAAGAAGGATAAGCAGCCAAAATTAGGGTGTGAAGATGGAGAAGATGAAAAGTCTAAGAAAGAGAACAAGGCTAAAAAGAAAGAGAAAAAGGTAAAGGAGCCACGTTTTGCGTTCTTGACTAAAAGTGAGATTGATCATCTTGAAGATGGATATAGATGGAGAAAATATGGACAGAAAGCTGTCAAGAATAGTCCTTACCCAAGGAGCTATTATAGATGCACAAGTCAGAAGTGCATTGTGAAGAAAAGGGTGGAGAGATCATACCAAGATCCATCAATTGTGATGACAACATATGAAGGACAACACAACCATCACTGTCCAGCAACACTTAGGGGTAATGCTTCATCCATGTTGTTGTCATCACCATCCCTCTTTGGTTCCACTTCAATGGGATTGGACCAAAGATTACACCAAGATTTCCTTTCTCAGTTTCTTCCAACTTATAGCCAAAATGATCAACAACAAATTTTCCACCAAAATCTTCACCAACCTCATCAGCAACATCAGCAGCAGCAGCAGTTTCACCTTCATCGTGACTATGGTTTGTTGCAAGATTTACTACCATCATCATTTCCTGGAAAACAAGAGCCTTGA 921 0.3865 MANENQDPFYHDELNHSNFSFSQNFQGFDPSSHSTSFSDYLHGSMDYNTLSKAFDLSCSSSEVISSIDDNNTKKSSAGDLSSLVGISETPNSSESSSSNEAVVEENSTNKKDKQPKLGCEDGEDEKSKKENKAKKKEKKVKEPRFAFLTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCIVKKRVERSYQDPSIVMTTYEGQHNHHCPATLRGNASSMLLSSPSLFGSTSMGLDQRLHQDFLSQFLPTYSQNDQQQIFHQNLHQPHQQHQQQQQFHLHRDYGLLQDLLPSSFPGKQEP* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0547 306 MobiDBLite consensus disorder prediction 105 140 - -
Mal8g0547 306 Pfam WRKY DNA -binding domain 157 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal8g0547 306 MobiDBLite consensus disorder prediction 66 140 - -
Mal8g0547 306 SMART WRKY_cls 156 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal8g0547 306 PANTHER WRKY TRANSCRIPTION FACTOR 71-RELATED 20 299 - -
Mal8g0547 306 MobiDBLite consensus disorder prediction 66 104 - -
Mal8g0547 306 Gene3D WRKY domain 141 217 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal8g0547 306 ProSiteProfiles WRKY domain profile. 151 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal8g0547 306 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 20 299 IPR044810 GO:0003700
Mal8g0547 306 SUPERFAMILY WRKY DNA-binding domain 149 216 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal8g0547 306 Coils Coil 119 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0547 Mal-Chr8 8293848 8296180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0547 22 306 WRKY Transcription Factor Family AT4G18170 43.366 1.35e-58 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal8g0547 WRKY 6.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0547 - - aprc:113847247 367.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g0547 8 8293848 8296180 Mal8g0547 8 8293848 8296180 ECH