Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0541 ATGCAGGAGCCTCTTCTCACTCTTTTCTCCAGTAATGGAGAAACACGTTCACCAAGTAAACCTTTACTCAATGATCAATCTGTCCATGATCTTGCTCCTTCTCCATCACTGTCTCGATCGAATTCACCTCATATCATCAATGAAACGAGGAAACCTTCTTTTATTAACCTCATAGCCAACTTGAGCATCAAGAAAGCGAAGATTATTCATCGCTCGCGCTCTGCTCCATCGGTATTATTCACTAACATGGGAGTAGATTTTCATGAGCCCTCTGATCATAGACCTGCATACAGGTCCTCAACTTTAATAGTTAGACTATCTTTCATTATTCTTTTCTTGTATGTAGCTATTGGTGTAACAGTGTACATGATAAGTGGGAGTTTCAAGGGCACTACCACATTCAAGCCTGTTGATGCTGTGTACTTTACAGTGGTAACTCTTTGCACTATTGGATATGGAGATATTGTTCCTGATTCCATATTTACAAAGATGTTTACATGTGGTTTCATTTTGGTTGGTTTTGGATTTATTGGTTTTATGCTTAATGAGTTGGTTGTATACATTTGTGATGCACATGAGACATTCTTATTGAGCATCATGGATGAGGATAGATATAAGAAAATTCTGAGAACTTACATGGTTAATGAAGAGAAAGGAAGAATGAGGATAAGAACCAAAGTTTGTGTTGCTTTGGTTGTTGTCACGGTATGTATTGCTGTTGGAACAGTTACAGCACACTTCGTTGAGAATCTGAATTGGGACGACAGTTTTTTTCTCTCAGTTACTTCTGTTACAACGGTTGGTTATGGAGACTATGCTTTTAGAACTTTAACTGGAAGATGTTTCGCAATTCTGTGGCTTTTGGTAAGCACATTCTCAGTTTCAAGGGCGTTTCTATACCTCACTGATTACAGCATGCAAAAGAGAAGCCGCGACATGGCCAAAATGGTTCTTCAGAAGAAGATAACCTTATCAGATTTAGCTGCTGCGGACCTTGATAATGATGGATCAATCAGTAAGTCAGACTTTGTCATATACAAGCTTAAGCAAATGGGAAAGATTACCGAGATAGACATTCTACAAATTAGCAGACAATTTGATTCCTTGGACCATGGCATGTATGGCAAGATAACTCTAGCTGACTTCATGGAAACTGTCTAA 1161 0.3867 MQEPLLTLFSSNGETRSPSKPLLNDQSVHDLAPSPSLSRSNSPHIINETRKPSFINLIANLSIKKAKIIHRSRSAPSVLFTNMGVDFHEPSDHRPAYRSSTLIVRLSFIILFLYVAIGVTVYMISGSFKGTTTFKPVDAVYFTVVTLCTIGYGDIVPDSIFTKMFTCGFILVGFGFIGFMLNELVVYICDAHETFLLSIMDEDRYKKILRTYMVNEEKGRMRIRTKVCVALVVVTVCIAVGTVTAHFVENLNWDDSFFLSVTSVTTVGYGDYAFRTLTGRCFAILWLLVSTFSVSRAFLYLTDYSMQKRSRDMAKMVLQKKITLSDLAAADLDNDGSISKSDFVIYKLKQMGKITEIDILQISRQFDSLDHGMYGKITLADFMETV* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0541 386 SUPERFAMILY Voltage-gated potassium channels 97 188 - -
Mal8g0541 386 PANTHER OS01G0696100 PROTEIN 48 381 - -
Mal8g0541 386 Pfam Ion channel 109 186 IPR013099 -
Mal8g0541 386 Pfam Ion channel 233 303 IPR013099 -
Mal8g0541 386 MobiDBLite consensus disorder prediction 1 26 - -
Mal8g0541 386 Gene3D - 188 330 - -
Mal8g0541 386 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 48 381 IPR003280 GO:0005267|GO:0016020|GO:0071805
Mal8g0541 386 PRINTS Two pore domain K+ channel signature 265 274 IPR003280 GO:0005267|GO:0016020|GO:0071805
Mal8g0541 386 PRINTS Two pore domain K+ channel signature 145 173 IPR003280 GO:0005267|GO:0016020|GO:0071805
Mal8g0541 386 SUPERFAMILY EF-hand 328 384 IPR011992 -
Mal8g0541 386 SUPERFAMILY Voltage-gated potassium channels 200 320 - -
Mal8g0541 386 Gene3D - 94 187 - -
Mal8g0541 386 ProSitePatterns EF-hand calcium-binding domain. 331 343 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0541 Mal-Chr8 8169042 8170821 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0541 65 384 Ion Channels AT4G18160 48.287 3.02e-105 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0541 K05389 - gmx:100789639 524.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g0541 8 8169042 8170821 Mal8g0541 8 8169042 8170821 ECH