Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0539 ATGTTTGGTGAAATGGAACACAAGCAAGAACAAGACAATGGCAACCAGAATAATAATATGTCTGGTAATGGTATTGATGTCACTCTATTATCTCCTAAAGTTCTGAAATCGGTTTCACCGGTTTCTTCTGCAGCTGAGGGCGAAACCTTAAAGCGGCCTCGCGGTCGGCCGGCTGGATCGAAAAACAAGCCTAAGCCACCAATTATTGTCACAAGAGATAGTGCTAATGCACTGAAAGCTCATGCTATGGAAGTGAACTCTGGTTGTGATGTGAATGAGAGCTTGTTAAACTTTGCAAGAAGAAAGCAACGTGGTCTTTGTATACTTAATGGCACTGGTTGTGTAACGAATGTAACGCTACGCCAACCAGCTTCGTCCAATGCTATTGTGACCCTTCATGGTCGATTCGAGATTCTCTCATTGTTGGGGTCGATTCTTCCCCCACCGGCACCACCAGGAATCACTGGTCTTACAATTTATTTAGCAGGCGCTCAAGGACAAGTTGTTGGAGGTGCCGTGGTTGGTGCTTTGATTGCTTCAGGACCAGTTGTGATCATGGCTGCATCATTCATGCATGCTACTTTCGATCGTCTGCCACTGGAAGACGATGAACTTGCTGCTGCAATGCAGAATCAGCATTACCAAAATGGACGCGCACAACATCATCTTGATATCTCTGACTTATATGCAATGCCGCAAAACCTCCTCATGAATGGTGCAATGCCACCTGAGATATACTCTTGGGCACCGGGGCGAAACATGTCAAAAACCTGA 774 0.4574 MFGEMEHKQEQDNGNQNNNMSGNGIDVTLLSPKVLKSVSPVSSAAEGETLKRPRGRPAGSKNKPKPPIIVTRDSANALKAHAMEVNSGCDVNESLLNFARRKQRGLCILNGTGCVTNVTLRQPASSNAIVTLHGRFEILSLLGSILPPPAPPGITGLTIYLAGAQGQVVGGAVVGALIASGPVVIMAASFMHATFDRLPLEDDELAAAMQNQHYQNGRAQHHLDISDLYAMPQNLLMNGAMPPEIYSWAPGRNMSKT* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0539 257 PIRSF ESCAROLA 2 253 IPR014476 GO:0003680
Mal8g0539 257 MobiDBLite consensus disorder prediction 38 69 - -
Mal8g0539 257 ProSiteProfiles PPC domain profile profile. 75 213 IPR005175 -
Mal8g0539 257 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 16 18 256 - -
Mal8g0539 257 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 18 256 IPR014476 GO:0003680
Mal8g0539 257 Gene3D - 77 222 - -
Mal8g0539 257 SUPERFAMILY AF0104/ALDC/Ptd012-like 75 207 - -
Mal8g0539 257 MobiDBLite consensus disorder prediction 1 26 - -
Mal8g0539 257 Pfam Plants and Prokaryotes Conserved (PCC) domain 80 190 IPR005175 -
Mal8g0539 257 MobiDBLite consensus disorder prediction 12 26 - -
Mal8g0539 257 CDD DUF296 81 161 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0539 Mal-Chr8 8158041 8158814 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0539 5 256 AT-hook Motif Nuclear Localized (AHL) Family AT2G42940 66.929 5.12e-104 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0539 - - gmx:100804941 383.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g0539 8 8158041 8158814 Mal8g0539 8 8158041 8158814 ECH