Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0520 ATGGAAACCAAGAAGCTCCAGTCTCGTTTCTCACTCGGCAGACAATCTTCCCTCGCACCGGATCACGAAGATTCCGCCACCGTCAACTCACCGGTAACCGACTCGGTGGATCCCACCGTTCGATTGATGTATTTAGCAAACGAAGGTGACTTAGAAGGAATCAACGATCTTCTAGACGGTGGTAGTGACGTCAATTTCCGTGACATTGACGGCCGCACCGCTCTCCATATCGCCGCCTGTCAAGGCCGCACCGACGTTGTCGAGTTTTTGCTCCAAAGAGGTGCTGAAGTTGATGTTCAAGATCGTTGGTGTAGCACTCCTCTTGCTGATGCATTGTATTACAAGAATCATGATGTTGTTAAGCTTTTGGAACAGCATGGTGCAAAACCTCCGGTGGCTCCTATGCATGTTCAGAATGCCCGTGAAGTCCCGGAATATGAGATTGATTCTTCTGAACTTGATCTTACAAATAGTGTTTACATAACAAAGGGAACTTTCCGGAGTGCATTTTGGCGTGGAATTCAAGTAGCTGTTAAAACTCTTGGCGAGGAAGTGTTCACCGATGACGATAAAGTTAAGGCGTTTCACGATGAGCTTACATTACTTCAGAAAGTAAGGCATCCAAATGTTGTCCAATTTTTGGGTGCTGTGACACAAAGCACCCCAATGATGATTGTCACTGAGTATCTACCCCAGGGGGATCTTCGTGCCTACTTGAAGCGGAAAGGTGCATTGAAACCAATAATAGCTGTGAAATTTGCACTTGATATTGCTAGGGGAATGAACTATTTGCATGAACATAAACCTGAAGCCATAATTCACCGAGATCTTGAGCCTTCAAATATTCTCCGGGATGATTCTGGGCATCTGAAAGTTGCAGACTTTGGAGTTAGCAAGTCACTGAAAATCACTAAAACAGTCAAAGAAGACAAACCTGTGACATGCCAGGATACATCATGGCGGTATGTTGCACCAGAGGTCTACAGAAATGAGGAATATGACACCAAAGTGGATGTGTTTTCTTTTGCTCTGATATTACAAGAGATGATTGAAGGTTGTCCACCATTTTATAGAAAGCCAGAAAATGAAGTGCCTAAAGCATATGTGGAAAATGAGCGTCCACCATTCAGGGCTTCGCCAAAGCTTTATCCCTATGGATTAAAAGATTTAATTGAGGAATGTTGGGATGGAGAACCATACCGAAGACCAACATTTAGGCAAATAATCGAGAGGTTGGATAAGATCGGCAACCATCTTGCTCAAAAGAGGTGCTGGAAGGCTCTGACTCCTACATGCATCCGGACTCTGGAGACCTTGTTTAAGGGGTATCCTACAAGTCCTGGTAGCCGATCAGCTCGCTCTACTGTTAGATAA 1374 0.4469 METKKLQSRFSLGRQSSLAPDHEDSATVNSPVTDSVDPTVRLMYLANEGDLEGINDLLDGGSDVNFRDIDGRTALHIAACQGRTDVVEFLLQRGAEVDVQDRWCSTPLADALYYKNHDVVKLLEQHGAKPPVAPMHVQNAREVPEYEIDSSELDLTNSVYITKGTFRSAFWRGIQVAVKTLGEEVFTDDDKVKAFHDELTLLQKVRHPNVVQFLGAVTQSTPMMIVTEYLPQGDLRAYLKRKGALKPIIAVKFALDIARGMNYLHEHKPEAIIHRDLEPSNILRDDSGHLKVADFGVSKSLKITKTVKEDKPVTCQDTSWRYVAPEVYRNEEYDTKVDVFSFALILQEMIEGCPPFYRKPENEVPKAYVENERPPFRASPKLYPYGLKDLIEECWDGEPYRRPTFRQIIERLDKIGNHLAQKRCWKALTPTCIRTLETLFKGYPTSPGSRSARSTVR* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0520 457 PRINTS Ankyrin repeat signature 71 86 IPR002110 GO:0005515
Mal8g0520 457 PRINTS Ankyrin repeat signature 119 133 IPR002110 GO:0005515
Mal8g0520 457 PRINTS Tyrosine kinase catalytic domain signature 383 405 IPR001245 GO:0004672|GO:0006468
Mal8g0520 457 PRINTS Tyrosine kinase catalytic domain signature 227 240 IPR001245 GO:0004672|GO:0006468
Mal8g0520 457 PRINTS Tyrosine kinase catalytic domain signature 266 284 IPR001245 GO:0004672|GO:0006468
Mal8g0520 457 PRINTS Tyrosine kinase catalytic domain signature 337 359 IPR001245 GO:0004672|GO:0006468
Mal8g0520 457 CDD STKc_MAP3K-like 159 412 - -
Mal8g0520 457 Pfam Ankyrin repeats (3 copies) 42 130 IPR002110 GO:0005515
Mal8g0520 457 Gene3D Transferase(Phosphotransferase) domain 1 143 421 - -
Mal8g0520 457 ProSiteProfiles Ankyrin repeat region circular profile. 70 102 - -
Mal8g0520 457 PIRSF ILK 2 434 - -
Mal8g0520 457 ProSiteProfiles Protein kinase domain profile. 155 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g0520 457 SMART ANK_2a 36 66 IPR002110 GO:0005515
Mal8g0520 457 SMART ANK_2a 103 132 IPR002110 GO:0005515
Mal8g0520 457 SMART ANK_2a 70 99 IPR002110 GO:0005515
Mal8g0520 457 Pfam Protein tyrosine and serine/threonine kinase 163 412 IPR001245 GO:0004672|GO:0006468
Mal8g0520 457 MobiDBLite consensus disorder prediction 1 33 - -
Mal8g0520 457 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 10 440 - -
Mal8g0520 457 SUPERFAMILY Ankyrin repeat 41 133 IPR036770 -
Mal8g0520 457 PANTHER INTEGRIN-LINKED KINASE FAMILY PROTEIN 10 440 - -
Mal8g0520 457 ProSiteProfiles Ankyrin repeat profile. 70 102 IPR002110 GO:0005515
Mal8g0520 457 SUPERFAMILY Protein kinase-like (PK-like) 164 412 IPR011009 -
Mal8g0520 457 Gene3D - 33 142 IPR036770 -
Mal8g0520 457 MobiDBLite consensus disorder prediction 8 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0520 Mal-Chr8 7948538 7956227 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0520 1 426 MAP Kinase Kinase Kinase AT4G18950 66.125 0.0 577
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Mal8g0520 PK_Tyr_Ser-Thr 8.8e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0520 - - gmx:100795964 764.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g0520 8 7948538 7956227 Mal2g1280 2 15346468 15352876 PCT