Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0508 ATGATCGGGCTCCTTATAAAGGACAGGTGTGATCATGTTTACAAATCCATTAAGTATGAGTCTGAAGAGAATCCAATAGGTATTTATAAGCGGGAGTTTGTTTGTCATCGTGCTGGTACTACTAAATCGGTCAAAGTTGATGAAGTGGAAAGTCAGAGGAAACGAAAAACTTCAAGGTGTAATTGTAGTGCAAAAATGCTTCTTACTGAAACGACAATTGGCACCGAGGAAAAATGGGTGGTAACATACTTTAGTAATGTCCACAATCATGAGTTGTTAGATGGTAAAGAAGTTACATTTCTCCCTGCATATCGTGACATCCCAATCGTTGATCAGAGTCGTATCTTGTTGATGGCAAAAGCTGGTTGCTCTATTAGTGTCACTGTGAGACTTCTTGAATTAGAGAAAGGAATAGATGTAGGTGGTCTACGGTTTTTGGAGAAAGATATTAGAAATTTCATTCAAGGCCAAAGTGGTATTGACAAAGAAAGTGATGCTTCAGATGTCCTCAAATTATGCAAAAGTCTGAAAGATTTAGATGATGCGTTCCAATATGACTTCACAATAGATGAAAATAAGAAATTGGAACATATTATCTGGGTTTTCGGTGATTCCATTCGTGCATATGAAGCTTTTGGCGATGTGGTTGTCTTTGATACCACATATCGAATAAATCGGTATGAGATGCCACTTGGAATATGGGTTGGGGTTGATAATCATGGAAATTCCATTATCTTTGGTTGTGTTCTATTACGAAATGAGAAGATTCCTTCATTTACTTGGGCTTTAAAGAAATTTTTAGCATTTGTCAAAGGAAAGTGTCCACAAACCATTCTTACTGATCAAGATCTCGCACTTACAGAAGCCATTGCAAAGGAATTGCCAAACACAAAACATGCATTTTGCATATGGCACATAGTGGCAAAGTTGTCAAGTTGGTTTTCACTTCCATTAGGTGCAAGATATAATGATTTCAAATATCAGTTTCATAAGGTGTATCATTTAGATTCTGCAGATGAGTTTGAACGACAATGGAAATCAATGGTTGCACAGTTTGATCTAAGTAAGGATACACATATTCATTTGCTCTATTCTCTTCGCGAATGTTGGGCTCTTGCTTATTTGAAGGACTTCTTTTTTGCTGGGATGACAACAACAGGACGTTCCGAATCGATAAATTCATACATAAAACATTTTTTGGATGCCAAAACAAGTTTGACCGATTTTATTGATAAAGTCGGTGTTGTTGTCCAAATAAGAAATCAAGCTGGCGAAGAGGCTAGAATGCGTCAAAAGTATCATAATCCCCAACTTAGGACAAGCTTTCCTATTGAGGAACATGCTGCCTCCATACTCACACCTTATGCTTTTGAGTTGATTCAGCTTGAGATCGAGTTATCTGCAAAATATGCAGCAACTGAAACAGACTCTGGGTCTTACATAGTTAAGCATCATACTAAAGATGATGGAGGTCGGATTGTAACTTTGATAGAAGGAGAAGAATCAATTTTTTGCTCTTGTAAAGAATTTGAGTTTTCTGGAATATTATGCAGGCATGCTATTAAAGTGTTACTGATGAAAAATTACTTTCATGTACCTTCAAAATATCTTCCTTTTCGATGGAGACGTGAAAGTTCATTGATACCAAAATCTAGGCACATAGTAAACTGCAATGATGGCTTCTCTATTGAGTTTCGGTCTCTAATTCAATGTCTTGAATTTGAGTCTTTAAAGACAAAAGAAAGGAAAGAAGTTGCTGCCAAAGGTTTGGAGAAACTCATCCGAGAGATAAAAGGGATGTCTGAAAGTCAAGAACATTTAATTGATTTGGAACTTGAGGTTCCAAATAATGATGATTATGATGTTGAAAATCCTATTCTTTCAAAAGCCAAAGGTCGACCAAAAGGATCAAGGCCAAAAGGAGGAGTTGAAGCCGCAAAGAAGGTTCGCCATTGTCATGTTCCAAATTGTGGTGGAACTAATCATGATTCACGAAATTGTCCAAACAAAAGAAAAAATATAGAAGCATTGCCTACTGATTCTCCTAATAAGGCCACAAAGGGCCGGAGAAACTCAAATTAA 2082 0.3694 MIGLLIKDRCDHVYKSIKYESEENPIGIYKREFVCHRAGTTKSVKVDEVESQRKRKTSRCNCSAKMLLTETTIGTEEKWVVTYFSNVHNHELLDGKEVTFLPAYRDIPIVDQSRILLMAKAGCSISVTVRLLELEKGIDVGGLRFLEKDIRNFIQGQSGIDKESDASDVLKLCKSLKDLDDAFQYDFTIDENKKLEHIIWVFGDSIRAYEAFGDVVVFDTTYRINRYEMPLGIWVGVDNHGNSIIFGCVLLRNEKIPSFTWALKKFLAFVKGKCPQTILTDQDLALTEAIAKELPNTKHAFCIWHIVAKLSSWFSLPLGARYNDFKYQFHKVYHLDSADEFERQWKSMVAQFDLSKDTHIHLLYSLRECWALAYLKDFFFAGMTTTGRSESINSYIKHFLDAKTSLTDFIDKVGVVVQIRNQAGEEARMRQKYHNPQLRTSFPIEEHAASILTPYAFELIQLEIELSAKYAATETDSGSYIVKHHTKDDGGRIVTLIEGEESIFCSCKEFEFSGILCRHAIKVLLMKNYFHVPSKYLPFRWRRESSLIPKSRHIVNCNDGFSIEFRSLIQCLEFESLKTKERKEVAAKGLEKLIREIKGMSESQEHLIDLELEVPNNDDYDVENPILSKAKGRPKGSRPKGGVEAAKKVRHCHVPNCGGTNHDSRNCPNKRKNIEALPTDSPNKATKGRRNSN* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0508 693 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 27 616 IPR031052 GO:0006355
Mal8g0508 693 MobiDBLite consensus disorder prediction 626 693 - -
Mal8g0508 693 Pfam MULE transposase domain 215 308 IPR018289 -
Mal8g0508 693 ProSiteProfiles Zinc finger SWIM-type profile. 480 528 IPR007527 GO:0008270
Mal8g0508 693 SMART 26again6 503 530 IPR006564 GO:0008270
Mal8g0508 693 PANTHER FAR1 DNA BINDING DOMAIN, ZINC FINGER, SWIM-TYPE, MULE TRANSPOSASE DOMAIN, FHY3/FAR1 FAMILY-RELATED 27 616 - -
Mal8g0508 693 Pfam SWIM zinc finger 498 528 IPR007527 GO:0008270
Mal8g0508 693 MobiDBLite consensus disorder prediction 637 651 - -
Mal8g0508 693 Pfam FAR1 DNA-binding domain 24 93 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0508 Mal-Chr8 7618804 7621227 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal8g0508 MULE 1.5e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0508 - - lja:Lj0g3v0071399.1 844.343