Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0466 ATGAGAAAACCTAAATCAAAGGAATTTCGCAAGCAACAACGCTACTCAGAGCAAGACGAAATCGAGCTCTTGGATTCATGGATTAAATCACAAAAACCAGACTCCGGTTCAAACCCAATGTCTCTCCCACCTCTCCCCAAAACCTCCCCCGTTGGCCGTCTCGCCGACGACACGTTCTCTCGCTACGCCGGCGTGGTGCGGTTTGAACAGTTACCGATATCGAAGAAAACCAAAGACGCATTGCGTGGTTCTAAATCTAAGTACGTTTCCATGACTGATATTCAACGAGCTTCTCTTCCTCATGCGCTTTGTGGCCGTGATGTTCTTGGTGCTGCGAAAACTGGTTCTGGAAAAACACTTGCTTTCATTATTCCTGTGTTGGAGAAATTGTATAGAGAGAAATGGGGACCGGAAGCTGGGGTTGGGAGCATAATCATATCACCTACAAGAGAATTAGCTGGTCAGACTTTTGATGTGTTGACGGATGTTGGGAAGCACCACAGTTTTAGTGCTGGCCTCCTCATTGGTGGTCGTAAGGATGTTGCTAAAGAGAAAGAACGTGTCAACAAGCTAAACATATTGATCTGCACACCCGGTCGCCTTTTACAACACATGAATGAAACACTCAATTTTGATTGTTCAGATATGAAGGTTTTGGTACTAGATGAGGCTGACCGTATTCTTGATAGTGGATTCAAGAAGGATCTAAATGCGATCATCTCACAATTACCACCACCAAAGGGTAGACAAACCTTGCTTTTCTCGGCAACTCAAACAAAGTCAGTTCAAGATCTTGCAAGACTAAGTTTGAAGGACCCAGAGTATCTAAGTGTGCACGAAGAGTCTGTGACTGCAACTCCTACTCTCTTGAAGCAAATTGTGATGATTGTTCCCTTGGATCAAAAGTTAGATATGCTATGGAGTTTCATAAAGACACATCTACAGTCAAAAACACTTGTCTTTCTTTCAAGCTGTAAACAGGTAAAATTTGTGTTTGAGGCATTTAAGAAACTTCACCCTGGCATACCGTTGAAGTGCCTTCATGGGAGGATGAAACAAGAAAAAAGAATGGCAATATATTCCGAGTTCTGTGAAAAGCGCTCAGTTCTCTTCTCAACTGATGTGGCTGCAAGAGGCCTTGATTTTAATAAGGCAGTCGACTGGGTTGTTCAGGTAGATTGTCCTGAGAATGTAGCATCTTACATACATCGAGTTGGCCGTACTGCTCGTTATAAATCTGATGGAAAGTCAGTTTTATTTCTATTGCCTTCAGAAACTCAGATGCTTGAAAAGTTAAAAGCAGCAAAGGTTCCAGTGCATTTGACCAAGCCAAAGAAAGAACTACTGCAACCAGTGTCCAGTTTGCTGACATCTTTGCTGGTCAAGTACCCAGAACTTCAGCAGCGGGCCCAAAGGGCGTTTGTCACATACTTGAGATCCATCCATCTCCAAAAGGATAAAGAGATCTTTGACGTTTTGAAACTTCCTATTGATGAGTATTCAGCATCATTAGGTCTGCCAATGACCCCCAAAATCCGTTTTCTAAACCAGAAAATTAAATCTAAAGCTGTCGCAACAAAATCAATTTTAGTTGAACCAGAGGTTCCAATAAAGGAAAATGTCTTGGAAGGTTCAAGAAAAAAGATAGACACAGTTGTTTTCAAAGATGAGGAAATTGAAAATGATCTTCTTCATGTGGCTGATACCTCAAATGAAGGCGACGTGAAGCCAGCTGAAATTGGAGAGTTAATGCCAGCAACTCGTTTATTAAAGAAAAAAAAGCTCAAGATTAACACGCATAGACCACTGGGGAGTCGGGTTGTATTCGATGATGAAGGCAACACACTTCCTCCACTAGCCAGGATTGCTGACCCACAAAGTGGCAATGGAACATTGATTGATCCAGAACAAAAAGCTGAATACTATAAAAGGATGCGAGAGGATTTAAAGAAGGCAGACAAGGAAGACAAACTTGTAGAGCGTCAGCGACTTAGAGATAAGAAATTTAAGCAGAAAATGAAATGGAAGGCTGGTAATGAGGAAGACGAGGACAACCAAGATGATATCTCTGGGTCAGAAGGAGACGAAATGGTGGATAGACGGCGGCATAAAAAGAGTAAAATATACTTTGATAGTGACAGTGATGAGGGTGAAAGGAAAAAAGTCACAGCCAATCAAACGGCGGAGCAAGTAGAGCTGGCTTTGAAGTTGTTACAATCCATGCAATAA 2229 0.4213 MRKPKSKEFRKQQRYSEQDEIELLDSWIKSQKPDSGSNPMSLPPLPKTSPVGRLADDTFSRYAGVVRFEQLPISKKTKDALRGSKSKYVSMTDIQRASLPHALCGRDVLGAAKTGSGKTLAFIIPVLEKLYREKWGPEAGVGSIIISPTRELAGQTFDVLTDVGKHHSFSAGLLIGGRKDVAKEKERVNKLNILICTPGRLLQHMNETLNFDCSDMKVLVLDEADRILDSGFKKDLNAIISQLPPPKGRQTLLFSATQTKSVQDLARLSLKDPEYLSVHEESVTATPTLLKQIVMIVPLDQKLDMLWSFIKTHLQSKTLVFLSSCKQVKFVFEAFKKLHPGIPLKCLHGRMKQEKRMAIYSEFCEKRSVLFSTDVAARGLDFNKAVDWVVQVDCPENVASYIHRVGRTARYKSDGKSVLFLLPSETQMLEKLKAAKVPVHLTKPKKELLQPVSSLLTSLLVKYPELQQRAQRAFVTYLRSIHLQKDKEIFDVLKLPIDEYSASLGLPMTPKIRFLNQKIKSKAVATKSILVEPEVPIKENVLEGSRKKIDTVVFKDEEIENDLLHVADTSNEGDVKPAEIGELMPATRLLKKKKLKINTHRPLGSRVVFDDEGNTLPPLARIADPQSGNGTLIDPEQKAEYYKRMREDLKKADKEDKLVERQRLRDKKFKQKMKWKAGNEEDEDNQDDISGSEGDEMVDRRRHKKSKIYFDSDSDEGERKKVTANQTAEQVELALKLLQSMQ* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0466 742 MobiDBLite consensus disorder prediction 27 50 - -
Mal8g0466 742 Pfam DEAD/DEAH box helicase 92 265 IPR011545 GO:0003676|GO:0005524
Mal8g0466 742 MobiDBLite consensus disorder prediction 693 725 - -
Mal8g0466 742 PANTHER RNA HELICASE 58 543 - -
Mal8g0466 742 CDD DEADc_DDX10 77 279 - -
Mal8g0466 742 Gene3D - 55 282 IPR027417 -
Mal8g0466 742 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 431 IPR027417 -
Mal8g0466 742 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 220 228 IPR000629 -
Mal8g0466 742 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 99 276 IPR014001 -
Mal8g0466 742 Coils Coil 642 662 - -
Mal8g0466 742 Pfam Helicase conserved C-terminal domain 302 411 IPR001650 -
Mal8g0466 742 PANTHER ATP-DEPENDENT RNA HELICASE DDX10-RELATED 58 543 - -
Mal8g0466 742 SMART DUF4217_3 451 514 IPR025313 -
Mal8g0466 742 SMART helicmild6 329 412 IPR001650 -
Mal8g0466 742 SMART ultradead3 87 293 IPR014001 -
Mal8g0466 742 Pfam Domain of unknown function (DUF4217) 455 512 IPR025313 -
Mal8g0466 742 CDD SF2_C_DEAD 290 421 - -
Mal8g0466 742 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 298 450 IPR001650 -
Mal8g0466 742 MobiDBLite consensus disorder prediction 669 726 - -
Mal8g0466 742 Gene3D - 287 531 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0466 Mal-Chr8 7004355 7010022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0466 95 433 Eukaryotic Initiation Factors Gene Family AT3G19760 30.233 5.20e-36 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0466 K14776 - gmx:100792106 1219.91