Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mal8g0454 | ATGACTATTACCATCACTTCACTAACTATGAACAAGTGGTTTTCTAGAACAATAGAAGCAATAACATGGTGTCAAGAATTTTTTTTTAGCTGTTCTGCATTTGAGAAATTCATGAAAGCCATGGAGAGATTTCTTTTTGCTGCATTCACCTGCATTTTAGCACTAGGAGGGTCAATAATAGGAACAATAGCAGGAGCTATCAAAGGCCAAACCACAGAAATTGGTTTTCTTGATGGAGCTGGCAAAGGAGCAATTGCAGGAGCCATTGCAGCCATTGAACTGATGAGTTTTGCTTCTGCGGCTGAGCCGTTTTCCAAGGTTGCTTTGTTGAGAAGTTTGTTAAATGGGAAAGTGTTTATGGAATGGATATGTCCAACTGTTGCACAAGCTTATCTGTTTTATATAAACTCACTAGAAACAGCTTATGGAGGAGTCCTTTCAGATATTTATGATGACATGGGAGTTAAGGGCATGCCACAAAATTGTATTATGAAGCTTCCATGTCAGCAATTCAGCTCCAACAACATGATGAAATTATACAATGAATCATGCTGCTCAATTTGCATCCAGGATTTTGAAGATGAAGAATTGGTGAGAATACTTCCAAAATGTAGCCACATTTTTCATTTAGAATGCATTGACAAGTGGCTGGTCCAACAAGGATCATGTCCTATTTGTAGAACTTATGTTCGTGAATAG | 699 | 0.3805 | MTITITSLTMNKWFSRTIEAITWCQEFFFSCSAFEKFMKAMERFLFAAFTCILALGGSIIGTIAGAIKGQTTEIGFLDGAGKGAIAGAIAAIELMSFASAAEPFSKVALLRSLLNGKVFMEWICPTVAQAYLFYINSLETAYGGVLSDIYDDMGVKGMPQNCIMKLPCQQFSSNNMMKLYNESCCSICIQDFEDEELVRILPKCSHIFHLECIDKWLVQQGSCPICRTYVRE* | 233 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mal8g0454 | 232 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 150 | 231 | IPR013083 | - | |
Mal8g0454 | 232 | SUPERFAMILY | RING/U-box | 178 | 230 | - | - | |
Mal8g0454 | 232 | CDD | RING-H2_PA-TM-RING | 184 | 227 | - | - | |
Mal8g0454 | 232 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 21 | 230 | - | - | |
Mal8g0454 | 232 | ProSiteProfiles | Zinc finger RING-type profile. | 185 | 227 | IPR001841 | - | |
Mal8g0454 | 232 | Pfam | Ring finger domain | 185 | 227 | IPR001841 | - | |
Mal8g0454 | 232 | PANTHER | NEP1-INTERACTING PROTEIN-LIKE 2 | 21 | 230 | IPR044523 | - | |
Mal8g0454 | 232 | SMART | ring_2 | 185 | 226 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mal8g0454 | Mal-Chr8 | 6884691 | 6887481 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mal8g0454 | 33 | 230 | C3H Transcription Factor Family | AT5G66070 | 34.286 | 2.17e-34 | 120 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mal8g0454 | - | K19041 | gmx:100305612 | 271.552 |