Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0454 ATGACTATTACCATCACTTCACTAACTATGAACAAGTGGTTTTCTAGAACAATAGAAGCAATAACATGGTGTCAAGAATTTTTTTTTAGCTGTTCTGCATTTGAGAAATTCATGAAAGCCATGGAGAGATTTCTTTTTGCTGCATTCACCTGCATTTTAGCACTAGGAGGGTCAATAATAGGAACAATAGCAGGAGCTATCAAAGGCCAAACCACAGAAATTGGTTTTCTTGATGGAGCTGGCAAAGGAGCAATTGCAGGAGCCATTGCAGCCATTGAACTGATGAGTTTTGCTTCTGCGGCTGAGCCGTTTTCCAAGGTTGCTTTGTTGAGAAGTTTGTTAAATGGGAAAGTGTTTATGGAATGGATATGTCCAACTGTTGCACAAGCTTATCTGTTTTATATAAACTCACTAGAAACAGCTTATGGAGGAGTCCTTTCAGATATTTATGATGACATGGGAGTTAAGGGCATGCCACAAAATTGTATTATGAAGCTTCCATGTCAGCAATTCAGCTCCAACAACATGATGAAATTATACAATGAATCATGCTGCTCAATTTGCATCCAGGATTTTGAAGATGAAGAATTGGTGAGAATACTTCCAAAATGTAGCCACATTTTTCATTTAGAATGCATTGACAAGTGGCTGGTCCAACAAGGATCATGTCCTATTTGTAGAACTTATGTTCGTGAATAG 699 0.3805 MTITITSLTMNKWFSRTIEAITWCQEFFFSCSAFEKFMKAMERFLFAAFTCILALGGSIIGTIAGAIKGQTTEIGFLDGAGKGAIAGAIAAIELMSFASAAEPFSKVALLRSLLNGKVFMEWICPTVAQAYLFYINSLETAYGGVLSDIYDDMGVKGMPQNCIMKLPCQQFSSNNMMKLYNESCCSICIQDFEDEELVRILPKCSHIFHLECIDKWLVQQGSCPICRTYVRE* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0454 232 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 150 231 IPR013083 -
Mal8g0454 232 SUPERFAMILY RING/U-box 178 230 - -
Mal8g0454 232 CDD RING-H2_PA-TM-RING 184 227 - -
Mal8g0454 232 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 21 230 - -
Mal8g0454 232 ProSiteProfiles Zinc finger RING-type profile. 185 227 IPR001841 -
Mal8g0454 232 Pfam Ring finger domain 185 227 IPR001841 -
Mal8g0454 232 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 21 230 IPR044523 -
Mal8g0454 232 SMART ring_2 185 226 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0454 Mal-Chr8 6884691 6887481 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0454 33 230 C3H Transcription Factor Family AT5G66070 34.286 2.17e-34 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0454 - K19041 gmx:100305612 271.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g0454 8 6884691 6887481 Mal8g0454 8 6884691 6887481 ECH