Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0453 ATGGGTAGTTGTTTGAGTAAAAAGGAATCTGAACTAGAACATAGACATGTCGGTGTTTCTGGTATGCAAAATCACAATCAAAATCATAATCATAATCACAATCACAAGAATCATGAACCTTACGTGAATCAATCAAAAACCCCTTTTCAACAACCTTACCAATTACCTAACAAACATGCCCCAAGTCCAAAGCCTATTGTTACAAACACAATTCTTGGTAAACAATTTGAAGATGTGAAGCAAATTTATACACTTGGTAAAGAATTAGGGAGAGGACAATTTGGTGTGACTTATCTTTGTACTGAAAATTCAACTGGATTGAAATATGCTTGCAAATCAATTTCAAAGAGGAAACTTGTTAGTAAATCTGATAAAGAGGATATAAAGAGGGAGATTCAAATCATGCAGCATATGAGTGGACAACCAAATATTGTTGAGTTTAAAGGTGCTTATGAGGATAAAAATTCAGTTCATGTTGTTATGGAACTTTGTGCTGGTGGTGAACTTTTTGATAGGATTATTGCTAAGGGGAAGTATAGTGAAAGAGCTGCAGCTTCAATTTGTAGACAAATTGTGAATGTTGTTCATATTTGTCATTTTATGGGTGTGATGCATAGAGATCTTAAGCCAGAAAATTTCTTGTTGTCTAGTAAGGATGATAAGGCAACTATCAAGGCCACTGATTTTGGCTTATCGGTTTTCATTGAAGAAGGAAAGGTATATCGAGACATAGTTGGCAGTGCTTATTATGTTGCGCCAGAAGTTCTACGTCGTAGATATGGGAAGGAAATAGATATATGGAGTGCAGGAGTTATATTGTATATCTTACTTTGTGGTGTGCCTCCATTTTGGGCAGAGACCGAAAAGGGAATATTTGACGCCATATTGCAAGGTCATATTGATTTTGAAAGTCGTCCATGGCCAAGCATATCAAACAGTGCTAAGGACCTTGTTAGTAAGATGCTTATACAAGACCCAAAGAAACGTATCACAGCTTCTCAGGTTCTAGAACATCCATGGCTTAAAGAGGGTGGCAATGCTCCCGACAAACCAATAGACAGTGCAGTCCTCTCCAGAATGAAGCAATTCAGAGCAATGAATAAACTTAAAAAACTCGCTCTCAAGGTAATTGCTGAGAATCTTTCTTCAGAAGAGATCCAAGGTTTGAAGGCAATGTTTACAAACATGGACACTGACAAAAGTGGTATGATCACATATGAGGAATTGAGGGCAGGATTGCAAAGACTCGGCTCAAAGCTGACTGAAGCTGAAGTGCGGCAGCTTATGGAAGCTGCTGATGTAGATGGAAATGGAACAATTGACTACATAGAATTCATCACTGCAACAATGCATAGACACAGATTAGAAAGAGATGATCATCTTTACAAGGCCTTCCAATACTTTGATAAAGACAACAGTGGTTTTATTACTAGAGATGAATTGGAAACAGCCATGAAGGAATACGGTATGGGTGACGAAGACACAATCAGGGAAATTATATCCGAAGTTGATACAGATAATGATGGTAGAATTAATTATGAAGAATTTTGTACAATGATGAGGAGTGGAGTCCAACAACAAGGCAAGCTATTCTAA 1596 0.3747 MGSCLSKKESELEHRHVGVSGMQNHNQNHNHNHNHKNHEPYVNQSKTPFQQPYQLPNKHAPSPKPIVTNTILGKQFEDVKQIYTLGKELGRGQFGVTYLCTENSTGLKYACKSISKRKLVSKSDKEDIKREIQIMQHMSGQPNIVEFKGAYEDKNSVHVVMELCAGGELFDRIIAKGKYSERAAASICRQIVNVVHICHFMGVMHRDLKPENFLLSSKDDKATIKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRRYGKEIDIWSAGVILYILLCGVPPFWAETEKGIFDAILQGHIDFESRPWPSISNSAKDLVSKMLIQDPKKRITASQVLEHPWLKEGGNAPDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENLSSEEIQGLKAMFTNMDTDKSGMITYEELRAGLQRLGSKLTEAEVRQLMEAADVDGNGTIDYIEFITATMHRHRLERDDHLYKAFQYFDKDNSGFITRDELETAMKEYGMGDEDTIREIISEVDTDNDGRINYEEFCTMMRSGVQQQGKLF* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0453 531 Pfam Protein kinase domain 83 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g0453 531 Gene3D Phosphorylase Kinase; domain 1 85 168 - -
Mal8g0453 531 Gene3D - 353 524 - -
Mal8g0453 531 ProSitePatterns EF-hand calcium-binding domain. 469 481 IPR018247 -
Mal8g0453 531 ProSiteProfiles EF-hand calcium-binding domain profile. 456 491 IPR002048 GO:0005509
Mal8g0453 531 SMART efh_1 460 488 IPR002048 GO:0005509
Mal8g0453 531 SMART efh_1 495 523 IPR002048 GO:0005509
Mal8g0453 531 SMART efh_1 388 416 IPR002048 GO:0005509
Mal8g0453 531 SMART efh_1 424 452 IPR002048 GO:0005509
Mal8g0453 531 SMART serkin_6 83 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g0453 531 Coils Coil 406 426 - -
Mal8g0453 531 Pfam EF-hand domain pair 459 521 IPR002048 GO:0005509
Mal8g0453 531 Pfam EF-hand domain pair 389 449 IPR002048 GO:0005509
Mal8g0453 531 PANTHER SERINE/THREONINE-PROTEIN KINASE 44 525 - -
Mal8g0453 531 CDD EFh_PI-PLC 389 522 - -
Mal8g0453 531 Gene3D Transferase(Phosphotransferase) domain 1 169 352 - -
Mal8g0453 531 ProSiteProfiles EF-hand calcium-binding domain profile. 420 455 IPR002048 GO:0005509
Mal8g0453 531 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 21-RELATED 44 525 - -
Mal8g0453 531 CDD EFh 463 521 IPR002048 GO:0005509
Mal8g0453 531 ProSiteProfiles EF-hand calcium-binding domain profile. 384 419 IPR002048 GO:0005509
Mal8g0453 531 ProSitePatterns EF-hand calcium-binding domain. 433 445 IPR018247 -
Mal8g0453 531 ProSiteProfiles EF-hand calcium-binding domain profile. 492 526 IPR002048 GO:0005509
Mal8g0453 531 ProSiteProfiles Protein kinase domain profile. 83 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g0453 531 ProSitePatterns EF-hand calcium-binding domain. 504 516 IPR018247 -
Mal8g0453 531 ProSitePatterns EF-hand calcium-binding domain. 397 409 IPR018247 -
Mal8g0453 531 ProSitePatterns Protein kinases ATP-binding region signature. 89 112 IPR017441 GO:0005524
Mal8g0453 531 SUPERFAMILY EF-hand 380 520 IPR011992 -
Mal8g0453 531 MobiDBLite consensus disorder prediction 21 43 - -
Mal8g0453 531 CDD STKc_CAMK 83 340 - -
Mal8g0453 531 SUPERFAMILY Protein kinase-like (PK-like) 83 348 IPR011009 -
Mal8g0453 531 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0453 Mal-Chr8 6859112 6862775 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0453 1 531 EF-hand Containing Proteins AT3G20410 73.406 0.0 827
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mal8g0453 Pkinase 5.9e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0453 K13412 - gmx:100794852 899.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g0453 8 6859112 6862775 Mal8g0453 8 6859112 6862775 ECH