Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0450 ATGCCCTCAGCTCAAGATCCATTTTACGTTGTCAAAGAAGATATTCAAGATTCTATTGATAGGTTGCAATCTAATTTTCATCAATGGGAAAACACTTCTGATACCGGCGAGCATTTGAACCTCTCAAAGGAAGTTCTTGCTGCTTGTGGAAGCATTGAATGGCAGGTGGATGAATTGGACAAAGCAATTTCTGTAGCATCTAGAGATCCTTCTTGGTATGGCATTGATGAAGTTGAGATTGAAAACAGGAGGAGATGGACCAGCAATGCTCGCACCCAGGTGCGCACAGTTAAGAAAACAGTGGAAGCTGGAAAGGGATCAAATACAACAACTCATGCTAGTATAAGTGGGATGCACAGGGAATTAATGAGGCTTCCAGATTCTCATCAAAGTACGTCTAAGTCTAACCAATATGCCGCTGGGGATAATGATGATTTCATAGAATCAGAATCAGATAGGCAAATGCTTCTTATAAAGAGGCAGGACGAGGAGTTAGATGAGCTTAGTTTAAGTGTACAGAGAATCGGAGGTGTTGGACTTACAATACATGAAGAGCTCCTTGGACAGGAAAAGATTCTAGATGAACTGGGCAATGAGATGGACAGTACATCCAATCGTCTAGATTTTGTCCAAAAAAGAGTGGCAATGGTGATGAAGAAGGCCAGTGCAAAGGGCCAAATCATGATGATATGTGGTTTGCTGGCCCTGTTCATTTTTCTTTTTATCTTGGTATTCTTCACCTAG 744 0.4153 MPSAQDPFYVVKEDIQDSIDRLQSNFHQWENTSDTGEHLNLSKEVLAACGSIEWQVDELDKAISVASRDPSWYGIDEVEIENRRRWTSNARTQVRTVKKTVEAGKGSNTTTHASISGMHRELMRLPDSHQSTSKSNQYAAGDNDDFIESESDRQMLLIKRQDEELDELSLSVQRIGGVGLTIHEELLGQEKILDELGNEMDSTSNRLDFVQKRVAMVMKKASAKGQIMMICGLLALFIFLFILVFFT* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0450 247 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 155 217 IPR000727 -
Mal8g0450 247 SUPERFAMILY t-snare proteins 5 101 IPR010989 GO:0016020|GO:0016192
Mal8g0450 247 Pfam SNARE domain 192 243 IPR000727 -
Mal8g0450 247 Gene3D - 2 104 - -
Mal8g0450 247 PANTHER SYNTAXIN PROTEIN 1 246 - -
Mal8g0450 247 Coils Coil 12 32 - -
Mal8g0450 247 SUPERFAMILY SNARE fusion complex 153 217 - -
Mal8g0450 247 SMART tSNARE_6 150 217 IPR000727 -
Mal8g0450 247 CDD SNARE_Qc 158 215 - -
Mal8g0450 247 Gene3D - 162 226 - -
Mal8g0450 247 Pfam Syntaxin 6, N-terminal 6 98 IPR015260 GO:0016020|GO:0048193
Mal8g0450 247 Coils Coil 193 213 - -
Mal8g0450 247 PANTHER SYNTAXIN 1 246 IPR045242 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0450 Mal-Chr8 6845463 6849814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0450 55 247 SNARE and Associated Proteins AT1G28490 69.948 2.24e-94 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0450 K08500 - gmx:100795447 385.185