Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0448 ATGATTTATGGTAGGTGTGCTGCTTGCAAGAGTCAAAGAAGAAGGTGCCCTTCTGATTGCATTTTCTCTCCATATTTCCCTGCCAATAATCCTCAAAGATTTGCTTCTGTCCACCGAATCTATGGTGGTAGCAATGTTGGAAAAATGCTTCAGCAATTGCCTCACTATGTAAGAGAACAAGCTGCAAATACTTTGTATTTAGAAGCACAATGTAGGATTCAAAATCCTGTTTATGGATGTGTTGGGATTATATCTAAATTGTATCAACAAATCCATGATACAGAAGTTGAGCTGGCCAAAATCCAAACTCAAATTGTTAGTCATAAGCTCCAAAATCAACAATATGAAGCTGGATCAAACTTCAATGTCTTGTCAACAGTTGATGCTGAATCAAACTTAAACTTTTTGCCACCACAAAGTAGCAGCATGGAGCAGTTTCAATGGCCTAATCAAGCTCCTAATTGGTTCAATTAA 474 0.3755 MIYGRCAACKSQRRRCPSDCIFSPYFPANNPQRFASVHRIYGGSNVGKMLQQLPHYVREQAANTLYLEAQCRIQNPVYGCVGIISKLYQQIHDTEVELAKIQTQIVSHKLQNQQYEAGSNFNVLSTVDAESNLNFLPPQSSSMEQFQWPNQAPNWFN* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0448 157 PANTHER LOB DOMAIN-CONTAINING PROTEIN 23-RELATED 1 116 - -
Mal8g0448 157 Coils Coil 84 104 - -
Mal8g0448 157 ProSiteProfiles LOB domain profile. 4 105 IPR004883 -
Mal8g0448 157 Pfam Lateral organ boundaries (LOB) domain 5 102 IPR004883 -
Mal8g0448 157 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0448 Mal-Chr8 6838411 6839277 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0448 5 105 AS2 family AT3G26660 64.356 7.84e-46 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mal8g0448 LOB 1.4e-36 No_clan