Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0413 ATGGCTTCCACTTACCGTGACCGTACGTCGGAGTTCCGATCACTTACAGAGACTCTCAAGAAAATCGGCGGCGGAAGCATACCACCGCCGAATCAACAACCGTCTACCTCTCAAAATTCCTATTCTAGATCCGAATTCAACCGAAAAGCATCACAAATCGGATTAGGAATCCACGAAACATCGCAGAAAATCGCCAGGCTCGCTAAATTGGCGAAGAAATCGTCGATGTTTAATGATCCAATAATGGAAATTCAAGAGCTGACTGCATTGATTAAGACTGATATAAGGACGTTGAATTCGGCTGTTTTGGATTTGCAAAATATTCAGAAGATTGATTTGGCTGATGAGAATTACTCAGACGATAGGGTCGTGCATTCTAATGCTGTTTGTGATGATTTGAAGAACAGGCTCATGGGTGCCACAAAGCATCTTCAAGATGTTTTGACTACTAGGACAGAGAATATCAAGGCTCACGAGAATAGGAAGCAAATATTTTCCAAGAACCCTTTACAGCATCAGCCAAAGCCAACTACTGAGCCACCACCTTGGTCTAATTCAACAAATGCATTTGAAACTGAGAATTTGCAACAAACATCAGGATTACCATCAAATGGAATTCCAGCTGGCAATCAGCTAAGACGAAGGTTAGCTGTGGAAAACACTCCATCCCAGCAAATGGAGATGTCTCTGGTACAACAGGTTATTCCTCGACACGAAGACTATGCTCAAAGTCGGGCAAGTGCTCTGCACAATGTGGAATCTACTATTACCGAACTTAGTGGAATCTTCACGCATTTGGCTACAATGGTTGCCCATCAAGGAGAGCTAGCTATCAGGATTGATGACAACATGGATGAGTCATTGGCAAATGTTGAAGGAGCTCACAGCTCTTTATTGAGGCATCTCAACCGAATATCATCAAATAGGTGGCTTATGATCAAAATCTTTGCCATTTTGATATTTTTTCTGATGATCTTCATATTCTTTGTGGCCTAA 996 0.4207 MASTYRDRTSEFRSLTETLKKIGGGSIPPPNQQPSTSQNSYSRSEFNRKASQIGLGIHETSQKIARLAKLAKKSSMFNDPIMEIQELTALIKTDIRTLNSAVLDLQNIQKIDLADENYSDDRVVHSNAVCDDLKNRLMGATKHLQDVLTTRTENIKAHENRKQIFSKNPLQHQPKPTTEPPPWSNSTNAFETENLQQTSGLPSNGIPAGNQLRRRLAVENTPSQQMEMSLVQQVIPRHEDYAQSRASALHNVESTITELSGIFTHLATMVAHQGELAIRIDDNMDESLANVEGAHSSLLRHLNRISSNRWLMIKIFAILIFFLMIFIFFVA* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0413 331 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 6 21 IPR021538 -
Mal8g0413 331 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 239 301 IPR000727 -
Mal8g0413 331 PANTHER SYNTAXIN-31 4 330 - -
Mal8g0413 331 Pfam SNARE domain 276 327 IPR000727 -
Mal8g0413 331 ProSitePatterns Syntaxin / epimorphin family signature. 245 284 IPR006012 GO:0005484|GO:0006886|GO:0016020
Mal8g0413 331 Gene3D - 38 294 - -
Mal8g0413 331 PANTHER SYNTAXIN 4 330 IPR045242 -
Mal8g0413 331 MobiDBLite consensus disorder prediction 159 188 - -
Mal8g0413 331 CDD SNARE_syntaxin5 242 317 - -
Mal8g0413 331 MobiDBLite consensus disorder prediction 28 45 - -
Mal8g0413 331 SUPERFAMILY t-snare proteins 42 294 IPR010989 GO:0016020|GO:0016192
Mal8g0413 331 SMART tSNARE_6 234 301 IPR000727 -
Mal8g0413 331 MobiDBLite consensus disorder prediction 17 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0413 Mal-Chr8 6211789 6217020 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0413 1 331 SNARE and Associated Proteins AT5G05760 62.899 6.26e-146 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0413 K08490 - gmx:100777383 487.263