Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0381 ATGAGGGGAAAGACACAATCATTATGGAGTTTCACACTAAAAGATTGTGGTGGGAATCAAGTTGGTAAAACCAAAATTGTTGACCAACAAAAACAAGGAGCATTCAAAACAATTCAAGGTGCCATTGACTCTATAAAGAGCCCAAATAATCATTGGATTGTGATTAATATAAATCCTGGTATCTACAAGGAAAAAGTTCATATACCTATCGAAAAGCCATGCATTGTATTGAAAGGATCGGGAAGCAATACCACAACAATTACTTATGATGATTCATCTCGCAATGGAGGCACAACTATGAGCGCTACATTCATTTCATCTCCACCTAATGTAGTTGTGAGCGGTATTACATTCAAGAACACGTATGGACCTGGCGCACCCGCAGTAGCAGCTAATTTTTATGGTGATAAATCTGTCATATTCGAATCTAGTTTTTATGGTTATCAAGATACATTGCTTGTAGATGGTGGGCGCTCTTACTTTAAAAATTGCTATATTCAAGGGGAGGTGGACTTTATTTTTGGTTCAGGACAATCTTATTTTGAGAATTGTTTGGTGAATGCTACACAAGGGGAAAATAGACTTCCAGGTTTTGTCACAGCACAAAAGCGGAATTCACAAGATGAAGCAAGTGGTTTTGTTTTCAGAGGAGGGTCTGTTGTTGGGACTGGTAAAGTAAATCTTGGAAGACCTTGGGGCCCTTACTCAAGAGTTATATATTGGGAAACATACTTTTCAGAAGTGGTAACTCCTCAAGGATGGGATGTTTGGAATCAGAACGGCCATGAGCGTAATATCATATTTGCAGAACTTTATTGCAAGGGACCAGGGGCCAATACCAGGAATCGTGTCAATTGGGAGAAGAAACCAAATGATATAAATCTAAGTGAATACACTTTATCGTCTTTCATAAATAATGATGGATGGCTTGCCAACGTACCATCTATATAA 951 0.3838 MRGKTQSLWSFTLKDCGGNQVGKTKIVDQQKQGAFKTIQGAIDSIKSPNNHWIVININPGIYKEKVHIPIEKPCIVLKGSGSNTTTITYDDSSRNGGTTMSATFISSPPNVVVSGITFKNTYGPGAPAVAANFYGDKSVIFESSFYGYQDTLLVDGGRSYFKNCYIQGEVDFIFGSGQSYFENCLVNATQGENRLPGFVTAQKRNSQDEASGFVFRGGSVVGTGKVNLGRPWGPYSRVIYWETYFSEVVTPQGWDVWNQNGHERNIIFAELYCKGPGANTRNRVNWEKKPNDINLSEYTLSSFINNDGWLANVPSI* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0381 316 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 14 316 - -
Mal8g0381 316 PANTHER PECTINESTERASE 14 316 - -
Mal8g0381 316 Pfam Pectinesterase 26 306 IPR000070 GO:0030599|GO:0042545
Mal8g0381 316 Gene3D - 18 315 IPR012334 -
Mal8g0381 316 SUPERFAMILY Pectin lyase-like 21 310 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0381 Mal-Chr8 5365088 5368496 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0381 15 263 Carbohydrate Esterase AT2G19150 46.899 1.12e-69 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0381 - - mtr:MTR_5g088290 398.282