Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0379 ATGAATGCCACTCAAGCGGGATCTAAACCTTCAGGTTTTGTCACAGCACAACGCAGGGATTCACCAACAGATCCAAATGGTTATGTTTTTAGAGGAGGGTCCGTTGTTGGGAATGGTCAAGTGAATCTTGGAAGACCTTGGGGTCCTTACTCAAGAGTTATATTTTGGGAAACATATTTCTCTCCCGTGGTAACTCCTCAAGGATGGGATGCTTGGGGTTTAAAAAAAGGCCAAGAGCAAAATATTACATATGTAGAAGTAAATTGTACGGGACCGGGAGCCAACACTGATAAACGTGTCGAGTGGGAGAAGAAACCAAATAGCATAAATTTGAACGATTTTACTTTGTCATCTTTCATAAATAATGATGGATGGCTTGCCAATATACCTTCTGTTTGA 399 0.411 MNATQAGSKPSGFVTAQRRDSPTDPNGYVFRGGSVVGNGQVNLGRPWGPYSRVIFWETYFSPVVTPQGWDAWGLKKGQEQNITYVEVNCTGPGANTDKRVEWEKKPNSINLNDFTLSSFINNDGWLANIPSV* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0379 132 Pfam Pectinesterase 8 122 IPR000070 GO:0030599|GO:0042545
Mal8g0379 132 PANTHER PECTINESTERASE 1 131 - -
Mal8g0379 132 MobiDBLite consensus disorder prediction 1 22 - -
Mal8g0379 132 SUPERFAMILY Pectin lyase-like 7 127 IPR011050 -
Mal8g0379 132 Gene3D - 1 131 IPR012334 -
Mal8g0379 132 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 1 131 - -
Mal8g0379 132 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0379 Mal-Chr8 5306036 5306711 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0379 2 126 Carbohydrate Esterase AT1G05310 38.889 2.90e-21 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0379 - - mtr:MTR_5g088290 189.504