Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0378 ATGAGTGTTTATTTCTACGAGAAACATACACACATTTATCAAAACACTTTCTTTGATTCAAATTCACGTGAGGAAAAAGTTCATATACCTCCTGGAAAGTCGTGCATTATTTTAAAAGGATCGGGTAGCAATAGCACAACCATTACTTACAACGATTCATTTCATAATGTTGGCACATCTATGAGCGCTACATTCCATTCATATCCATCTAATGTGGTTTTGAGTGGCATTACATTCGAGAACACGTATGGATACAACGGACCAGCAGTAGCAGCCTCTTTATATGGTGATAAATCAGCAATTTTCGAATGTAGGTTCATTGGTTATCAAGATACCTTGCTTTCATCAAAGGGGCGCCAATATTTTAAAAATTGTTATATTCAAGGTGAAGATGATTTCATATTTGGTGCTGGCCAATCTTATTTTGAGGAAATCATCTTGATGAGTCAACCATGA 456 0.3596 MSVYFYEKHTHIYQNTFFDSNSREEKVHIPPGKSCIILKGSGSNSTTITYNDSFHNVGTSMSATFHSYPSNVVLSGITFENTYGYNGPAVAASLYGDKSAIFECRFIGYQDTLLSSKGRQYFKNCYIQGEDDFIFGAGQSYFEEIILMSQP* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0378 151 Pfam Pectinesterase 24 147 IPR000070 GO:0030599|GO:0042545
Mal8g0378 151 PANTHER PECTINESTERASE 23 147 - -
Mal8g0378 151 SUPERFAMILY Pectin lyase-like 24 145 IPR011050 -
Mal8g0378 151 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 23 147 - -
Mal8g0378 151 Gene3D - 5 151 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0378 Mal-Chr8 5296984 5300552 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0378 25 147 Carbohydrate Esterase AT2G19150 49.612 2.30e-31 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0378 - - mtr:MTR_5g088290 153.68