Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0374 ATGCTGCACTTCAAAATGTCAATGGCTTCTTCAGACGAATGGGTGAAGGAATATAATGAAGCAATGAAACTTGCTGAGGATATCAGCAGCATGGTTTCTGACTGGAGTTCCCATCCTGCATCTGGACCGGAAATCCAGCGGCAATCATCTGCTATAAGAAGGAAGATTACAATATTAGGGACTAGGCTTGATAGCTTGCAATCCCTTTTATCAAAGCTTCCTGGAAAGCAGCCTCTATCTGAGAAGGAGAAGAATCGTCGAAAGGACATGCTTGCAAATTTGAGATCAAAAGTCAACCAGATGTAA 306 0.4248 MLHFKMSMASSDEWVKEYNEAMKLAEDISSMVSDWSSHPASGPEIQRQSSAIRRKITILGTRLDSLQSLLSKLPGKQPLSEKEKNRRKDMLANLRSKVNQM* 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0374 101 MobiDBLite consensus disorder prediction 77 93 - -
Mal8g0374 101 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 8 98 - -
Mal8g0374 101 SUPERFAMILY t-snare proteins 20 101 IPR010989 GO:0016020|GO:0016192
Mal8g0374 101 PANTHER SYNTAXIN 8 98 IPR045242 -
Mal8g0374 101 MobiDBLite consensus disorder prediction 74 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0374 Mal-Chr8 5216513 5219675 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0374 7 101 SNARE and Associated Proteins AT1G79590 68.750 8.98e-41 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0374 K08503 - gmx:100782666 155.606
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g0374 8 5216513 5219675 Mal8g0374 8 5216513 5219675 ECH
Mal2g4771 2 104795159 104796866 Mal8g0374 8 5216513 5219675 PCT