Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0317 ATGATGCCGAGTGTTAACTCCGGTTCATCCGACAAAGACACCGAGGCATTTGCAGAAACCGATCCTACTGGTCGATATGGTAGATACCCTGAACTATTAGGATGTGGTGCTGTGAAGAAAGTGTACCGCGCATTTGATCAAGAAGAAGGAATAGAGGTAGCATGGAACCAAGTGAAACTAAGGAACTTCTGTGATGAACCTGCTATGGTAGAGAGGCTTTATTCTGAAGTGAGGTTATTGAGAAGCTTAACAAACAAAAACATCATTGAACTTTATAGTGTTTGGAGTGATGATAGAAACAACACGCTTAATTTCATCACCGAGGTTTGTACAAGTGGGAATTTGAGAGAGTATAGAAAAAAACATAGACATGTTTCTATGAAGGCTTTGAAGAAATGGTCTAGGCAGATTTTGAAAGGATTGAATTATTTGCACACTCATGAGCCTTGCATCATCCATAGAGATCTCAATTGCAGTAATGTGTTTGTTAATGGGAATGTTGGCCAGGTTAAGATTGGTGACTTGGGTTTAGCAGCAATTGTGGGGAAGAATCACATTGCACACACAATTCTTGGCACACCAGAGTTTATGGCTCCAGAGTTATATGACGAAGACTACACAGAATTGGTGGACATATACTCATTTGGTATGTGTGTATTAGAAATGGTGACATTGGAAATTCCTTATAGTGAGTGCGACAATGTCGCCAAAATATACAAGAAGGTTTCTTCTGGGATAAGACCTGCGGCAATGAGCAAGGTCAAAGATTCAGAGGTAAAGGAGTTCATTGAGAGGTGTCTTGCTCAGCCAAGAGCTAGACCTTCTGCTGCCGAGCTTCTCAACGATCCTTTCTTTGATGAACTTGTGGGTGAGGATGATTATGAAGACGACGAAAATGATGATTATGTTCATTGA 915 0.4077 MMPSVNSGSSDKDTEAFAETDPTGRYGRYPELLGCGAVKKVYRAFDQEEGIEVAWNQVKLRNFCDEPAMVERLYSEVRLLRSLTNKNIIELYSVWSDDRNNTLNFITEVCTSGNLREYRKKHRHVSMKALKKWSRQILKGLNYLHTHEPCIIHRDLNCSNVFVNGNVGQVKIGDLGLAAIVGKNHIAHTILGTPEFMAPELYDEDYTELVDIYSFGMCVLEMVTLEIPYSECDNVAKIYKKVSSGIRPAAMSKVKDSEVKEFIERCLAQPRARPSAAELLNDPFFDELVGEDDYEDDENDDYVH* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0317 304 MobiDBLite consensus disorder prediction 1 22 - -
Mal8g0317 304 PANTHER SERINE/THREONINE-KINASE WNK11-LIKE PROTEIN 2 301 - -
Mal8g0317 304 Pfam Protein kinase domain 31 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g0317 304 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g0317 304 Gene3D Transferase(Phosphotransferase) domain 1 110 290 - -
Mal8g0317 304 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 2 301 - -
Mal8g0317 304 CDD STKc_WNK 25 285 - -
Mal8g0317 304 PIRSF TyrPK_CSF1-R 28 131 - -
Mal8g0317 304 PIRSF TyrPK_CSF1-R 119 301 - -
Mal8g0317 304 SUPERFAMILY Protein kinase-like (PK-like) 23 286 IPR011009 -
Mal8g0317 304 Gene3D Phosphorylase Kinase; domain 1 10 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0317 Mal-Chr8 4444133 4446394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0317 6 289 MAP Kinase Kinase Kinase AT5G55560 80.634 0.0 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Mal8g0317 Pkinase 7.3e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0317 K08867 - gmx:100816060 533.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g0317 8 4444133 4446394 Mal8g0317 8 4444133 4446394 ECH
Mal2g3587 2 56223261 56225156 Mal8g0317 8 4444133 4446394 PCT