Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0311 ATGCAAACATCTCTTAATCACAAAATGTCATATGATTCTAGTATGTTCAGCATTGAGCCTATACAAAATCTAGACTCATATTGCTTCCTGCAAAATGAGAATCTCGAAAACTACTCATCTTCTGATAACGGTAGCCATTCAACCTACCCTTCATTTCAAGCTTTAGAACAATCCCTTGAATCTTCTAACAATAGTCCGGTCTCGAAGCTACAGTCAAAATCTTACACGTTCACTTCGCGAAACTCTCTTGAAACCATCAATGATTCTTTAGAGAACGAATCTTGCTCGACACATAACCAAGATGACTTGTGGCACAAGATAAGAGAGCTTGAAAATGCTATGCTAGGACATGATGCTGCAGATATGCTAGACGTATATAATGATACTGTAATAATTCAACAAGAATCTGATCCACTTTTGTTAGAGGCAGAAAAGTGGAACAAAATGATTGGGATGATATCTAGAGGGGATTTGAAAGAAATTCTTTTTACATGTGCAAAAGCAATATCAGAAAATGATATGGAAACAGCCGAATGGTTAATGTCAGAGTTGTCGAAAATGGTTTCAGTTTCAGGAAATCCAATCCAAAGGTTAGGAGCATACATGTTGGAATCTCTTGTTGCTAGAATAGCTTCTTCCGGTAGCTTAATATACAAATCCTTGAAATGTAAAGAGCCTATAACTGCTACTAGTAAAGAACTACTTTCACACATGCATGTGCTTTATGAAATTTGTCCTTACCTCAAATTTGGATACATGTCAGCAAATGGTGTAATTGCTGAAGCCTTGAAAGATGAAAGTGAAGTTCATATAATTGATTTTCAGATTAATCAGGGAATTCAGTGGATGAGTCTAATCCAAGCACTTGCTGGAAAACCTGGGGGACCGCCGAAGATCAGAATAACCGGTCTTGATGATTCAACTTCAGCTTATGCTAGAGGAGGAGGACTTGGTATTGTTGGAGAAAGGTTATCAAAACTTGCACAGTCATATAATGTAGCATTTGAGTTTAATGCTATAGGGGCTAGTCCTTCTGAGGTGAAACTTGAAGACCTTGAACTTCGTCGCGGTGAAGCTATTGCGGTTAATTTTGCCATGATGCTGCACCATGTACCGGATGAAAATGTACATGGTGGTCAGAATCATCGCGACCGATTGGTGAGATTGGCAAAATGTTTGTCTCCTAAGGTAGTGACTCTTGTTGAGCAAGAATCAAATACCAATGAGCTTCCGTTCTTCGCACGTTTTGTCGAGACAATGAACTACTACTTCGCAGTTTTTGAATCAATTGATGTTGCTTTGCCAAGGGAGCACAGAGAAAGGATTAATGTGGAACAGCATTGCTTGGCTCGCGAAGTGGTCAATTTAGTAGCGTGTGAAGGCGCAGAAAGAGTTGAACGTCACGAGGTTCTGAAGAAGTGGAGATCATGTTTTACAATGGCTGGATTCACACCATATCCATTAAGCTCTTATATTAATCGTTCAATACAAAATCTTCTAGAAAGTTACCAAGGAAATTATACTCTACAAGAGAAAGATGGTGCTCTTTATCTTGGTTGGATGAATCAAGCTCTTATTACTTCTAGTGCTTGGAAGTGA 1599 0.3884 MQTSLNHKMSYDSSMFSIEPIQNLDSYCFLQNENLENYSSSDNGSHSTYPSFQALEQSLESSNNSPVSKLQSKSYTFTSRNSLETINDSLENESCSTHNQDDLWHKIRELENAMLGHDAADMLDVYNDTVIIQQESDPLLLEAEKWNKMIGMISRGDLKEILFTCAKAISENDMETAEWLMSELSKMVSVSGNPIQRLGAYMLESLVARIASSGSLIYKSLKCKEPITATSKELLSHMHVLYEICPYLKFGYMSANGVIAEALKDESEVHIIDFQINQGIQWMSLIQALAGKPGGPPKIRITGLDDSTSAYARGGGLGIVGERLSKLAQSYNVAFEFNAIGASPSEVKLEDLELRRGEAIAVNFAMMLHHVPDENVHGGQNHRDRLVRLAKCLSPKVVTLVEQESNTNELPFFARFVETMNYYFAVFESIDVALPREHRERINVEQHCLAREVVNLVACEGAERVERHEVLKKWRSCFTMAGFTPYPLSSYINRSIQNLLESYQGNYTLQEKDGALYLGWMNQALITSSAWK* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0311 532 ProSiteProfiles GRAS family profile. 149 532 IPR005202 -
Mal8g0311 532 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 17 532 IPR005202 -
Mal8g0311 532 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 17 532 - -
Mal8g0311 532 Pfam GRAS domain family 159 532 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0311 Mal-Chr8 4384940 4386538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0311 81 532 GRAS Transcription Factor Family AT5G48150 61.810 0.0 568
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mal8g0311 GRAS 5.8e-130 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0311 - - cam:101502619 888.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g0311 8 4384940 4386538 Mal8g0311 8 4384940 4386538 ECH
Mal2g3583 2 56151461 56153089 Mal8g0311 8 4384940 4386538 PCT