Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0289 ATGGCTACTACTACATTTTTACCACTTTACCCTTACAATTCTACGTTCTTTGTTCAAATTCCTTCCTCTAATTATGCTTTTACTTCTTCATTTCTGAGACGAAGCAAATTCACTGTTCTTTCTGCTCATTCCAATCCCAAAATTCTTAAAACCAACCGAAAATCAACCTATGGAAAATTCCTCTCTCCGTATGACTCTGATGAAGAAATGGACTATGAAGACGATGAAGATGATGATGATGATGATGATGATGATTTGTTCTCTGATGAAGAGGAGTTTGCTGAGCCTGTTGATCTTGATGCTAAAGACAAGAGATTGAAGTCAAAGATACTTGCAGATAGACCACATGAAAAGGAAAAGGGTGTGAGATCCCTTAACAGTGGACAAAGCAATAGATTGCCCAAAAGTCAGAGAATAGCATCCTTACAAAAAAATAACAGTGCAAAGTTTGGTAGAAACTCTAAGGAGAAAAGATATCCAATGTTGTCTGAAGAGATTTTTTTGGATATGAAATGGTTACCACTTCTTGATTACTTAAGCACCTTTGGAATTAAGGAATCACAATTCATCCAAATTTATGAGAGGCACAAGTCGTCATTTCAAATTAATGTATGTTCTGCACGGGAAAGGATAGATTACTTATTGAGTCTTGGGGTTAAACATAAAGATATAAGAAGAATCCTTTTGCGGCAACCACAAATTCTAGAGTACTCGGTGGAGAACAATTTGAAGACTCATGTTGCTTTTTTAATGGGCTTGGGAGTACCTAGTACTAAAATAGGGCAAATTATTGCTTCTACTCCGTCCCTTTTTTCTTACAGTGTTGAGAATTCATTAAAACCAACGGTGAGATATTTAATTGAGGAAGTCGGCATCAAGGAAAAAGATTTGGGTAAAGTCATTCAACTGAGTCCTCAAATTATTGTCCAACGTATTGACATTTCATGGAATACTCGATCTATGTTTCTTACCGAAGAGTTGGGTGCACCCAAAGAGAGCATTGTGAAGATGGTGACGAAACACCCTCAGCTTCTGCATTACAGTATTGATGATGGATTGCTTCCAAGAATAAATTTCCTAAGGAGCATAGGAATGAAAAATGCAGACATCTTGAAAATCTTGACTAGTCTTACACAGGTGCTGTCTCTGTCCTTGGAAGCTAATCTAAAGCCAAAGTATTTGTACTTGGTAAATGAACTTCAGAATGAAGTGCAAACCTTGACCAAATACCCGATGTACCTTAGCTTGTCTTTGGACCAGAGAATTCTTCCTCGTCATAAGTTCTTGGTTTACCTAAAGAAAGCTCCAAAAGGACCATTTCCTCTTGGATCTTTAGTTCCAACTGATGAATCCTTTTGTCAACGGTGGGCTGGAACTACTCTTGATAAATATGTGGCATTTCGCCAGAGATTATTGCTCAAAAAGTTTGCTGAGAAATATAACAGAAAAATGTGA 1455 0.3725 MATTTFLPLYPYNSTFFVQIPSSNYAFTSSFLRRSKFTVLSAHSNPKILKTNRKSTYGKFLSPYDSDEEMDYEDDEDDDDDDDDDLFSDEEEFAEPVDLDAKDKRLKSKILADRPHEKEKGVRSLNSGQSNRLPKSQRIASLQKNNSAKFGRNSKEKRYPMLSEEIFLDMKWLPLLDYLSTFGIKESQFIQIYERHKSSFQINVCSARERIDYLLSLGVKHKDIRRILLRQPQILEYSVENNLKTHVAFLMGLGVPSTKIGQIIASTPSLFSYSVENSLKPTVRYLIEEVGIKEKDLGKVIQLSPQIIVQRIDISWNTRSMFLTEELGAPKESIVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMKNADILKILTSLTQVLSLSLEANLKPKYLYLVNELQNEVQTLTKYPMYLSLSLDQRILPRHKFLVYLKKAPKGPFPLGSLVPTDESFCQRWAGTTLDKYVAFRQRLLLKKFAEKYNRKM* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0289 484 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF9, CHLOROPLASTIC 28 476 - -
Mal8g0289 484 MobiDBLite consensus disorder prediction 108 123 - -
Mal8g0289 484 MobiDBLite consensus disorder prediction 67 87 - -
Mal8g0289 484 Gene3D Transcription termination factor 3, mitochondrial 233 471 IPR038538 -
Mal8g0289 484 SMART mt_12 225 256 IPR003690 GO:0003690|GO:0006355
Mal8g0289 484 SMART mt_12 404 436 IPR003690 GO:0003690|GO:0006355
Mal8g0289 484 SMART mt_12 261 293 IPR003690 GO:0003690|GO:0006355
Mal8g0289 484 SMART mt_12 298 330 IPR003690 GO:0003690|GO:0006355
Mal8g0289 484 SMART mt_12 190 220 IPR003690 GO:0003690|GO:0006355
Mal8g0289 484 SMART mt_12 335 366 IPR003690 GO:0003690|GO:0006355
Mal8g0289 484 SMART mt_12 371 403 IPR003690 GO:0003690|GO:0006355
Mal8g0289 484 MobiDBLite consensus disorder prediction 60 87 - -
Mal8g0289 484 Pfam mTERF 176 431 IPR003690 GO:0003690|GO:0006355
Mal8g0289 484 PANTHER CGI-12 PROTEIN-RELATED 28 476 IPR003690 GO:0003690|GO:0006355
Mal8g0289 484 MobiDBLite consensus disorder prediction 108 147 - -
Mal8g0289 484 MobiDBLite consensus disorder prediction 124 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0289 Mal-Chr8 4095294 4097946 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mal8g0289 mTERF 7.6e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0289 K15032 - gmx:102660933 662.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g0289 8 4095294 4097946 Mal8g0289 8 4095294 4097946 ECH