Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g0265 ATGGATTACAATGAAACGGTGAAAACGATGGTTCCATATACACAACAACTCAACAATGACTTGGAGACCTTCTATGTCAAACTCACTCAGTTTTTGGACCCCTCTGGACTCAATCTCATGTCATTGAAAAATTATGTGAAATATAAAATGGATGAATCATCATGCTCATGTACCTTTGTTCCAATTCTATTTGGCAGTTTCAATGTCCGAGAAGCACTCCTAGACTTGTACCTGCTTTACTTGGAGGTCACCAAAAGAGGAGGTTATCACCAGGTTGGCCAAGAAAACAAATGGTGTGAAGTTGTTTCTGCACTAAAATTGGAAAGAAACAATCCAAGTCCAACCTTATGTGCTCAAGTTGAAAAGCTCTATCGTAGTCTTCTATACGAATTTGAGAAATTGTACTTCTACAGGTCTCCAGCAACTCAAACTGCGACTGGCGGCTGCACAAAAGGTCCTGTTAAAAGGAAGCGAAACTCAACCCCTAGTTTATCTCAATTAACAGATTATGAAGATTATCTGAAGGCAGCAAAGATATCCAAGGACTACTCTTATCTAGTTACAGGTAACAAGGATCTAGAATATTAA 588 0.3878 MDYNETVKTMVPYTQQLNNDLETFYVKLTQFLDPSGLNLMSLKNYVKYKMDESSCSCTFVPILFGSFNVREALLDLYLLYLEVTKRGGYHQVGQENKWCEVVSALKLERNNPSPTLCAQVEKLYRSLLYEFEKLYFYRSPATQTATGGCTKGPVKRKRNSTPSLSQLTDYEDYLKAAKISKDYSYLVTGNKDLEY* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g0265 195 SMART bright_3 43 137 IPR001606 GO:0003677
Mal8g0265 195 SUPERFAMILY ARID-like 13 140 IPR036431 GO:0003677
Mal8g0265 195 Gene3D - 3 148 IPR036431 GO:0003677
Mal8g0265 195 CDD ARID 82 132 - -
Mal8g0265 195 PANTHER HMG (HIGH MOBILITY GROUP) BOX PROTEIN 15 189 - -
Mal8g0265 195 Pfam ARID/BRIGHT DNA binding domain 22 132 IPR001606 GO:0003677
Mal8g0265 195 SMART ARID_2 15 132 - -
Mal8g0265 195 PANTHER HIGH MOBILITY GROUP B PROTEIN 9 15 189 - -
Mal8g0265 195 ProSiteProfiles ARID domain profile. 18 136 IPR001606 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g0265 Mal-Chr8 3872114 3873840 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g0265 21 140 ARID Transcription Factor Family AT1G76110 28.346 1.29e-08 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Mal8g0265 ARID 3.3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g0265 - - mtr:MTR_5g095070 191.045